Literature DB >> 16788208

Involvement of Y-family DNA polymerases in mutagenesis caused by oxidized nucleotides in Escherichia coli.

Masami Yamada1, Tatsuo Nunoshiba, Masatomi Shimizu, Petr Gruz, Hiroyuki Kamiya, Hideyoshi Harashima, Takehiko Nohmi.   

Abstract

Escherichia coli DNA polymerase IV incorporated 2-hydroxy-dATP opposite template guanine or thymine and 8-hydroxy-dGTP exclusively opposite adenine in vitro. Mutator phenotypes in sod/fur strains were substantially diminished by deletion of dinB and/or umuDC. DNA polymerases IV and V may be involved in mutagenesis caused by incorporation of the oxidized deoxynucleoside triphosphates.

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Year:  2006        PMID： 16788208      PMCID： PMC1482991          DOI： 10.1128/JB.00281-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  35 in total

1.  The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity.

Authors:  J Wagner; S Fujii; P Gruz; T Nohmi; R P Fuchs
Journal:  EMBO Rep       Date:  2000-12       Impact factor: 8.807

2.  Escherichia coli DNA polymerase III can replicate efficiently past a T-T cis-syn cyclobutane dimer if DNA polymerase V and the 3' to 5' exonuclease proofreading function encoded by dnaQ are inactivated.

Authors:  Angela Borden; Paul I O'Grady; Dominique Vandewiele; Antonio R Fernández de Henestrosa; Christopher W Lawrence; Roger Woodgate
Journal:  J Bacteriol       Date:  2002-05       Impact factor: 3.490

3.  The Y-family of DNA polymerases.

Authors:  H Ohmori; E C Friedberg; R P Fuchs; M F Goodman; F Hanaoka; D Hinkle; T A Kunkel; C W Lawrence; Z Livneh; T Nohmi; L Prakash; S Prakash; T Todo; G C Walker; Z Wang; R Woodgate
Journal:  Mol Cell       Date:  2001-07       Impact factor: 17.970

Review 4.  Error-prone repair DNA polymerases in prokaryotes and eukaryotes.

Authors:  Myron F Goodman
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

5.  Role of iron and superoxide for generation of hydroxyl radical, oxidative DNA lesions, and mutagenesis in Escherichia coli.

Authors:  T Nunoshiba; F Obata; A C Boss; S Oikawa; T Mori; S Kawanishi; K Yamamoto
Journal:  J Biol Chem       Date:  1999-12-03       Impact factor: 5.157

6.  SOS mutator DNA polymerase IV functions in adaptive mutation and not adaptive amplification.

Authors:  G J McKenzie; P L Lee; M J Lombardo; P J Hastings; S M Rosenberg
Journal:  Mol Cell       Date:  2001-03       Impact factor: 17.970

7.  Spontaneous tumorigenesis in mice defective in the MTH1 gene encoding 8-oxo-dGTPase.

Authors:  T Tsuzuki; A Egashira; H Igarashi; T Iwakuma; Y Nakatsuru; Y Tominaga; H Kawate; K Nakao; K Nakamura; F Ide; S Kura; Y Nakabeppu; M Katsuki; T Ishikawa; M Sekiguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-25       Impact factor: 11.205

8.  Specificity of replicative and SOS-inducible DNA polymerases in frameshift mutagenesis: mutability of Salmonella typhimurium strains overexpressing SOS-inducible DNA polymerases to 30 chemical mutagens.

Authors:  Keiko Matsui; Masami Yamada; Masaru Imai; Kazuo Yamamoto; Takehiko Nohmi
Journal:  DNA Repair (Amst)       Date:  2006-02-07

9.  Hydrolysis of oxidized nucleotides by the Escherichia coli Orf135 protein.

Authors:  H Kamiya; N Murata-Kamiya; E Iida; H Harashima
Journal:  Biochem Biophys Res Commun       Date:  2001-11-02       Impact factor: 3.575

10.  All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis.

Authors:  R Napolitano; R Janel-Bintz; J Wagner; R P Fuchs
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598
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  20 in total

1.  RpoS, the stress response sigma factor, plays a dual role in the regulation of Escherichia coli's error-prone DNA polymerase IV.

Authors:  Kimberly A M Storvik; Patricia L Foster
Journal:  J Bacteriol       Date:  2010-05-14       Impact factor: 3.490

2.  Transcriptional modulator NusA interacts with translesion DNA polymerases in Escherichia coli.

Authors:  Susan E Cohen; Veronica G Godoy; Graham C Walker
Journal:  J Bacteriol       Date:  2008-11-07       Impact factor: 3.490

Review 3.  Mutators and hypermutability in bacteria: the Escherichia coli paradigm.

Authors:  R Jayaraman
Journal:  J Genet       Date:  2009-12       Impact factor: 1.166

4.  Antibiotics induce redox-related physiological alterations as part of their lethality.

Authors:  Daniel J Dwyer; Peter A Belenky; Jason H Yang; I Cody MacDonald; Jeffrey D Martell; Noriko Takahashi; Clement T Y Chan; Michael A Lobritz; Dana Braff; Eric G Schwarz; Jonathan D Ye; Mekhala Pati; Maarten Vercruysse; Paul S Ralifo; Kyle R Allison; Ahmad S Khalil; Alice Y Ting; Graham C Walker; James J Collins
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-06       Impact factor: 11.205

Review 5.  Physiology of the read-write genome.

Authors:  James A Shapiro
Journal:  J Physiol       Date:  2014-06-01       Impact factor: 5.182

6.  The GO system prevents ROS-induced mutagenesis and killing in Pseudomonas aeruginosa.

Authors:  Laurie H Sanders; Julee Sudhakaran; Mark D Sutton
Journal:  FEMS Microbiol Lett       Date:  2009-03-10       Impact factor: 2.742

7.  Nucleotide binding interactions modulate dNTP selectivity and facilitate 8-oxo-dGTP incorporation by DNA polymerase lambda.

Authors:  Matthew J Burak; Kip E Guja; Miguel Garcia-Diaz
Journal:  Nucleic Acids Res       Date:  2015-07-28       Impact factor: 16.971

8.  Spontaneous and photosensitization-induced mutations in primary mouse cells transitioning through senescence and immortalization.

Authors:  Andrew W Caliri; Stella Tommasi; Steven E Bates; Ahmad Besaratinia
Journal:  J Biol Chem       Date:  2020-06-02       Impact factor: 5.157

9.  Translesion DNA Synthesis.

Authors:  Alexandra Vaisman; John P McDonald; Roger Woodgate
Journal:  EcoSal Plus       Date:  2012-11

10.  Critical amino acids in human DNA polymerases eta and kappa involved in erroneous incorporation of oxidized nucleotides.

Authors:  Atsushi Katafuchi; Akira Sassa; Naoko Niimi; Petr Grúz; Hirofumi Fujimoto; Chikahide Masutani; Fumio Hanaoka; Toshihiro Ohta; Takehiko Nohmi
Journal:  Nucleic Acids Res       Date:  2009-11-25       Impact factor: 16.971
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