Literature DB >> 16787050

Cooperative 4-pyridone H-bonds with extraordinary stability. A DFT molecular orbital study.

Yung-Fou Chen1, J J Dannenberg.   

Abstract

The N-H...O H-bonding enthalpy between 4-pyridones connected in a chain of H-bonds can achieve 23 kcal/mol for the most central H-bonds, while that between two 4-pyridones is 9.90 kcal/mol based upon DFT calculations on the counterpoise-corrected potential energy surfaces. That the range of enthalpies for N-H...O H-bonds can vary from as little as 2 to as much 23 kcal/mol depends primarily upon the polarizability of whatever internally connects the N-H and C=O within the H-bonding molecule, which are two parallel -C=C- entities in 4-pyridone. The contribution of covalent or charge-transfer interactions between the pi-systems of adjacent 4-pyridones is small.

Entities:  

Year:  2006        PMID: 16787050     DOI: 10.1021/ja060494l

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  8 in total

1.  Aggregation of capped hexaglycine strands into hydrogen-bonding motifs representative of pleated and rippled β-sheets, collagen, and polyglycine I and II crystal structures. A density functional theory study.

Authors:  Joshua A Plumley; Midas I-Hsien Tsai; J J Dannenberg
Journal:  J Phys Chem B       Date:  2011-01-25       Impact factor: 2.991

2.  Comparison of β-sheets of capped polyalanine with those of the tau-amyloid structures VQIVYK and VQIINK. A density functional theory study.

Authors:  Joshua A Plumley; J J Dannenberg
Journal:  J Phys Chem B       Date:  2011-08-11       Impact factor: 2.991

3.  A comparison of the behavior of functional/basis set combinations for hydrogen-bonding in the water dimer with emphasis on basis set superposition error.

Authors:  Joshua A Plumley; J J Dannenberg
Journal:  J Comput Chem       Date:  2011-02-15       Impact factor: 3.376

4.  Using electronic polarization from the internal continuum (EPIC) for intermolecular interactions.

Authors:  Jean-François Truchon; Anthony Nicholl's; J Andrew Grant; Radu I Iftimie; Benoît Roux; Christopher I Bayly
Journal:  J Comput Chem       Date:  2010-03       Impact factor: 3.376

5.  The importance of hydrogen bonding between the glutamine side chains to the formation of amyloid VQIVYK parallel beta-sheets: an ONIOM DFT/AM1 study.

Authors:  Joshua A Plumley; J J Dannenberg
Journal:  J Am Chem Soc       Date:  2010-02-17       Impact factor: 15.419

6.  Cooperative effects and optimal halogen bonding motifs for self-assembling systems.

Authors:  Xin Cindy Yan; Patric Schyman; William L Jorgensen
Journal:  J Phys Chem A       Date:  2014-04-08       Impact factor: 2.781

7.  Strong Short-Range Cooperativity in Hydrogen-Bond Chains.

Authors:  Nicholas Dominelli-Whiteley; James J Brown; Kamila B Muchowska; Ioulia K Mati; Catherine Adam; Thomas A Hubbard; Alex Elmi; Alisdair J Brown; Ian A W Bell; Scott L Cockroft
Journal:  Angew Chem Int Ed Engl       Date:  2017-06-01       Impact factor: 15.336

Review 8.  The Nature of Hydrogen Bonds: A Delineation of the Role of Different Energy Components on Hydrogen Bond Strengths and Lengths.

Authors:  Stephanie C C van der Lubbe; Célia Fonseca Guerra
Journal:  Chem Asian J       Date:  2019-07-19
  8 in total

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