Literature DB >> 16784233

Conformational cycling in beta-phosphoglucomutase catalysis: reorientation of the beta-D-glucose 1,6-(Bis)phosphate intermediate.

Jianying Dai1, Liangbing Wang, Karen N Allen, Peter Radstrom, Debra Dunaway-Mariano.   

Abstract

Activated Lactococcus lactis beta-phosphoglucomutase (betaPGM) catalyzes the conversion of beta-d-glucose 1-phosphate (betaG1P) derived from maltose to beta-d-glucose 6-phosphate (G6P). Activation requires Mg(2+) binding and phosphorylation of the active site residue Asp8. Initial velocity techniques were used to define the steady-state kinetic constants k(cat) = 177 +/- 9 s(-)(1), K(m) = 49 +/- 4 microM for the substrate betaG1P and K(m) = 6.5 +/- 0.7 microM for the activator beta-d-glucose 1,6-bisphosphate (betaG1,6bisP). The observed transient accumulation of [(14)C]betaG1,6bisP (12% at approximately 0.1 s) in the single turnover reaction carried out with excess betaPGM (40 microM) and limiting [(14)C]betaG1P (5 microM) and betaG1,6bisP (5 microM) supported the role of betaG1,6bisP as a reaction intermediate in the conversion of the betaG1P to G6P. Single turnover reactions of [(14)C]betaG1,6bisP with excess betaPGM were carried out to demonstrate that phosphoryl transfer rather than ligand binding is rate-limiting and to show that the betaG1,6bisP binds to the active site in two different orientations (one positioning the C(1)phosphoryl group for reaction with Asp8, and the other orientation positioning the C(6)phosphoryl group for reaction with Asp8) with roughly the same efficiency. Single turnover reactions carried out with betaPGM, [(14)C]betaG1P, and unlabeled betaG1,6bisP demonstrated complete exchange of label to the betaG1,6bisP during the catalytic cycle. Thus, the reorientation of the betaG1,6bisP intermediate that is required to complete the catalytic cycle occurs by diffusion into solvent followed by binding in the opposite orientation. Published X-ray structures of betaG1P suggest that the reorientation and phosphoryl transfer from betaG1,6bisP occur by conformational cycling of the enzyme between the active site open and closed forms via cap domain movement. Last, the equilibrium ratio of betaG1,6bisP to betaG1P plus G6P was examined to evidence a significant stabilization of betaPGM aspartyl phosphate.

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Year:  2006        PMID: 16784233     DOI: 10.1021/bi060136v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.

Authors:  Jooyoung Park; Ann M Guggisberg; Audrey R Odom; Niraj H Tolia
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-08-25

2.  The catalytic scaffold of the haloalkanoic acid dehalogenase enzyme superfamily acts as a mold for the trigonal bipyramidal transition state.

Authors:  Zhibing Lu; Debra Dunaway-Mariano; Karen N Allen
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-08       Impact factor: 11.205

3.  Panoramic view of a superfamily of phosphatases through substrate profiling.

Authors:  Hua Huang; Chetanya Pandya; Chunliang Liu; Nawar F Al-Obaidi; Min Wang; Li Zheng; Sarah Toews Keating; Miyuki Aono; James D Love; Brandon Evans; Ronald D Seidel; Brandan S Hillerich; Scott J Garforth; Steven C Almo; Patrick S Mariano; Debra Dunaway-Mariano; Karen N Allen; Jeremiah D Farelli
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

Review 4.  Markers of fitness in a successful enzyme superfamily.

Authors:  Karen N Allen; Debra Dunaway-Mariano
Journal:  Curr Opin Struct Biol       Date:  2009-11-02       Impact factor: 6.809

5.  The X-ray crystallographic structure and specificity profile of HAD superfamily phosphohydrolase BT1666: comparison of paralogous functions in B. thetaiotaomicron.

Authors:  Zhibing Lu; Debra Dunaway-Mariano; Karen N Allen
Journal:  Proteins       Date:  2011-08-30

Review 6.  Enzyme promiscuity: engine of evolutionary innovation.

Authors:  Chetanya Pandya; Jeremiah D Farelli; Debra Dunaway-Mariano; Karen N Allen
Journal:  J Biol Chem       Date:  2014-09-10       Impact factor: 5.157

7.  Discovery of a Kojibiose Phosphorylase in Escherichia coli K-12.

Authors:  Keya Mukherjee; Tamari Narindoshvili; Frank M Raushel
Journal:  Biochemistry       Date:  2018-04-30       Impact factor: 3.162

8.  Identification and characterization of an archaeal kojibiose catabolic pathway in the hyperthermophilic Pyrococcus sp. strain ST04.

Authors:  Jong-Hyun Jung; Dong-Ho Seo; James F Holden; Cheon-Seok Park
Journal:  J Bacteriol       Date:  2014-01-03       Impact factor: 3.490

9.  Bacillus cereus phosphopentomutase is an alkaline phosphatase family member that exhibits an altered entry point into the catalytic cycle.

Authors:  Timothy D Panosian; David P Nannemann; Guy R Watkins; Vanessa V Phelan; W Hayes McDonald; Brian E Wadzinski; Brian O Bachmann; Tina M Iverson
Journal:  J Biol Chem       Date:  2010-12-30       Impact factor: 5.157

10.  α-Fluorophosphonates reveal how a phosphomutase conserves transition state conformation over hexose recognition in its two-step reaction.

Authors:  Yi Jin; Debabrata Bhattasali; Erika Pellegrini; Stephanie M Forget; Nicola J Baxter; Matthew J Cliff; Matthew W Bowler; David L Jakeman; G Michael Blackburn; Jonathan P Waltho
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-07       Impact factor: 11.205

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