Literature DB >> 16774037

A human protein atlas based on antibody proteomics.

Anja Persson1, Sophia Hober, Mathias Uhlén.   

Abstract

The Human Protein Atlas is a comprehensive database that provides the protein expression profiles for a large number of human proteins, presented as immunohistological images from most human tissues. This review provides an overview of the contents of the atlas, discusses the project strategy and highlights the importance of open access for data validation and quality. Essential procedures that are implemented during antibody production and image generation, such as the use of protein epitope signature tags (PrEST) antigens, monospecific antibodies, tissue microarrays and thorough quality validation, are also discussed. The Human Protein Atlas is related to four other expression atlas initiatives, including, in particular, an upcoming protein atlas developed by the Sanger Institute.

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Year:  2006        PMID: 16774037

Source DB:  PubMed          Journal:  Curr Opin Mol Ther        ISSN: 1464-8431


  18 in total

1.  Tumor-targeted RNA-interference: functional non-viral nanovectors.

Authors:  Xinghua Pan; Rachel Thompson; Xiaojie Meng; Daocheng Wu; Liang Xu
Journal:  Am J Cancer Res       Date:  2011-09-01       Impact factor: 6.166

2.  Construction of à la carte QconCAT protein standards for multiplexed quantification of user-specified target proteins.

Authors:  James Johnson; Victoria M Harman; Catarina Franco; Edward Emmott; Nichola Rockliffe; Yaqi Sun; Lu-Ning Liu; Ayako Takemori; Nobuaki Takemori; Robert J Beynon
Journal:  BMC Biol       Date:  2021-09-08       Impact factor: 7.431

3.  Bioinformatic identification and characterization of human endothelial cell-restricted genes.

Authors:  Manoj Bhasin; Lei Yuan; Derin B Keskin; Hasan H Otu; Towia A Libermann; Peter Oettgen
Journal:  BMC Genomics       Date:  2010-05-28       Impact factor: 3.969

Review 4.  The annotation of both human and mouse kinomes in UniProtKB/Swiss-Prot: one small step in manual annotation, one giant leap for full comprehension of genomes.

Authors:  Silvia Braconi Quintaje; Sandra Orchard
Journal:  Mol Cell Proteomics       Date:  2008-04-24       Impact factor: 5.911

5.  A community standard format for the representation of protein affinity reagents.

Authors:  David E Gloriam; Sandra Orchard; Daniela Bertinetti; Erik Björling; Erik Bongcam-Rudloff; Carl A K Borrebaeck; Julie Bourbeillon; Andrew R M Bradbury; Antoine de Daruvar; Stefan Dübel; Ronald Frank; Toby J Gibson; Larry Gold; Niall Haslam; Friedrich W Herberg; Tara Hiltke; Jörg D Hoheisel; Samuel Kerrien; Manfred Koegl; Zoltán Konthur; Bernhard Korn; Ulf Landegren; Luisa Montecchi-Palazzi; Sandrine Palcy; Henry Rodriguez; Sonja Schweinsberg; Volker Sievert; Oda Stoevesandt; Michael J Taussig; Marius Ueffing; Mathias Uhlén; Silvère van der Maarel; Christer Wingren; Peter Woollard; David J Sherman; Henning Hermjakob
Journal:  Mol Cell Proteomics       Date:  2009-08-11       Impact factor: 5.911

6.  The role of properdin in zymosan- and Escherichia coli-induced complement activation.

Authors:  Morten Harboe; Peter Garred; Julie K Lindstad; Anne Pharo; Fredrik Müller; Gregory L Stahl; John D Lambris; Tom E Mollnes
Journal:  J Immunol       Date:  2012-07-30       Impact factor: 5.422

7.  MALDI profiling of human lung cancer subtypes.

Authors:  Angelo Gámez-Pozo; Iker Sánchez-Navarro; Manuel Nistal; Enrique Calvo; Rosario Madero; Esther Díaz; Emilio Camafeita; Javier de Castro; Juan Antonio López; Manuel González-Barón; Enrique Espinosa; Juan Angel Fresno Vara
Journal:  PLoS One       Date:  2009-11-05       Impact factor: 3.240

8.  Iron behaving badly: inappropriate iron chelation as a major contributor to the aetiology of vascular and other progressive inflammatory and degenerative diseases.

Authors:  Douglas B Kell
Journal:  BMC Med Genomics       Date:  2009-01-08       Impact factor: 3.063

9.  A genome-wide RNA interference screen identifies new regulators of androgen receptor function in prostate cancer cells.

Authors:  Keren Imberg-Kazdan; Susan Ha; Alex Greenfield; Christopher S Poultney; Richard Bonneau; Susan K Logan; Michael J Garabedian
Journal:  Genome Res       Date:  2013-02-12       Impact factor: 9.043

10.  High-resolution mapping of linear antibody epitopes using ultrahigh-density peptide microarrays.

Authors:  Søren Buus; Johan Rockberg; Björn Forsström; Peter Nilsson; Mathias Uhlen; Claus Schafer-Nielsen
Journal:  Mol Cell Proteomics       Date:  2012-09-13       Impact factor: 5.911

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