Literature DB >> 16766188

The RNA degradosome: life in the fast lane of adaptive molecular evolution.

Maria Jose Marcaida1, Mark A DePristo, Vidya Chandran, Agamemnon J Carpousis, Ben F Luisi.   

Abstract

In Escherichia coli, the multi-enzyme RNA degradosome contributes to the global, posttranscriptional regulation of gene expression. The degradosome components are recognized through natively unstructured "microdomains" comprising as few as 15-40 amino acids. Consequently, the degradosome might experience a comparatively smaller number of evolutionary constraints, because there is little requirement to maintain a folded state for the interaction sites. New regulatory properties of the degradosome could arise with relative rapidity, because partners that modify its function could be recruited by quickly evolving microdomains. The unusual combination of the centrality of RNA degradation in gene expression and the generality of natively unstructured microdomains in recognition can fortuitously confer a capacity for efficacious adaptive change to degradosome-like assemblies in eubacteria.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16766188     DOI: 10.1016/j.tibs.2006.05.005

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  49 in total

1.  Temperature-sensitive mutants of RNase E in Salmonella enterica.

Authors:  Disa L Hammarlöf; Lars Liljas; Diarmaid Hughes
Journal:  J Bacteriol       Date:  2011-09-23       Impact factor: 3.490

2.  Characterization of the RNA degradosome of Pseudoalteromonas haloplanktis: conservation of the RNase E-RhlB interaction in the gammaproteobacteria.

Authors:  Soraya Aït-Bara; Agamemnon J Carpousis
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

Review 3.  Using the power of genetic suppressors to probe the essential functions of RNase E.

Authors:  Diarmaid Hughes
Journal:  Curr Genet       Date:  2015-08-01       Impact factor: 3.886

4.  Quaternary structure and biochemical properties of mycobacterial RNase E/G.

Authors:  Mirijam-Elisabeth Zeller; Agnes Csanadi; Andras Miczak; Thierry Rose; Thierry Bizebard; Vladimir R Kaberdin
Journal:  Biochem J       Date:  2007-04-01       Impact factor: 3.857

5.  Dark-induced mRNA instability involves RNase E/G-type endoribonuclease cleavage at the AU-box and SD sequences in cyanobacteria.

Authors:  Yoshinao Horie; Yoko Ito; Miyuki Ono; Naoko Moriwaki; Hideki Kato; Yuriko Hamakubo; Tomoki Amano; Masaaki Wachi; Makoto Shirai; Munehiko Asayama
Journal:  Mol Genet Genomics       Date:  2007-07-28       Impact factor: 3.291

6.  The end defines the means in bacterial mRNA decay.

Authors:  Daniel R Schoenberg
Journal:  Nat Chem Biol       Date:  2007-09       Impact factor: 15.040

7.  MSMEG_4626 ribonuclease from Mycobacterium smegmatis.

Authors:  Agnes Csanadi; Ildiko Faludi; Andras Miczak
Journal:  Mol Biol Rep       Date:  2009-01-20       Impact factor: 2.316

8.  Reconstitution and analysis of the multienzyme Escherichia coli RNA degradosome.

Authors:  Jonathan A R Worrall; Maria Górna; Nicholas T Crump; Lara G Phillips; Alex C Tuck; Amanda J Price; Vassiliy N Bavro; Ben F Luisi
Journal:  J Mol Biol       Date:  2008-07-27       Impact factor: 5.469

9.  Role of the five RNA helicases in the adaptive response of Bacillus cereus ATCC 14579 cells to temperature, pH, and oxidative stresses.

Authors:  Franck Pandiani; Stéphanie Chamot; Julien Brillard; Frédéric Carlin; Christophe Nguyen-the; Véronique Broussolle
Journal:  Appl Environ Microbiol       Date:  2011-06-24       Impact factor: 4.792

10.  Crystal structure of Escherichia coli PNPase: central channel residues are involved in processive RNA degradation.

Authors:  Zhonghao Shi; Wei-Zen Yang; Sue Lin-Chao; Kin-Fu Chak; Hanna S Yuan
Journal:  RNA       Date:  2008-09-23       Impact factor: 4.942

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.