Literature DB >> 16756507

Ribonucleotide reductases.

Pär Nordlund1, Peter Reichard.   

Abstract

Ribonucleotide reductases (RNRs) transform RNA building blocks to DNA building blocks by catalyzing the substitution of the 2'OH-group of a ribonucleotide with a hydrogen by a mechanism involving protein radicals. Three classes of RNRs employ different mechanisms for the generation of the protein radical. Recent structural studies of members from each class have led to a deeper understanding of their catalytic mechanism and allosteric regulation by nucleoside triphosphates. The main emphasis of this review is on regulation of RNR at the molecular and cellular level. Conformational transitions induced by nucleotide binding determine the regulation of substrate specificity. An intricate interplay between gene activation, enzyme inhibition, and protein degradation regulates, together with the allosteric effects, enzyme activity and provides the appropriate amount of deoxynucleotides for DNA replication and repair. In spite of large differences in the amino acid sequences, basic structural features are remarkably similar and suggest a common evolutionary origin for the three classes.

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Year:  2006        PMID: 16756507     DOI: 10.1146/annurev.biochem.75.103004.142443

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  485 in total

1.  Discovery of antimicrobial ribonucleotide reductase inhibitors by screening in microwell format.

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-04       Impact factor: 11.205

2.  A hot oxidant, 3-NO2Y122 radical, unmasks conformational gating in ribonucleotide reductase.

Authors:  Kenichi Yokoyama; Ulla Uhlin; JoAnne Stubbe
Journal:  J Am Chem Soc       Date:  2010-11-03       Impact factor: 15.419

3.  Structural interconversions modulate activity of Escherichia coli ribonucleotide reductase.

Authors:  Nozomi Ando; Edward J Brignole; Christina M Zimanyi; Michael A Funk; Kenichi Yokoyama; Francisco J Asturias; Joanne Stubbe; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

4.  Investigation of in vivo diferric tyrosyl radical formation in Saccharomyces cerevisiae Rnr2 protein: requirement of Rnr4 and contribution of Grx3/4 AND Dre2 proteins.

Authors:  Yan Zhang; Lili Liu; Xiaorong Wu; Xiuxiang An; JoAnne Stubbe; Mingxia Huang
Journal:  J Biol Chem       Date:  2011-09-19       Impact factor: 5.157

5.  The diferric-tyrosyl radical cluster of ribonucleotide reductase and cytosolic iron-sulfur clusters have distinct and similar biogenesis requirements.

Authors:  Haoran Li; Martin Stümpfig; Caiguo Zhang; Xiuxiang An; JoAnne Stubbe; Roland Lill; Mingxia Huang
Journal:  J Biol Chem       Date:  2017-05-17       Impact factor: 5.157

6.  Molecular mechanisms of thioredoxin and glutaredoxin as hydrogen donors for Mammalian s phase ribonucleotide reductase.

Authors:  Farnaz Zahedi Avval; Arne Holmgren
Journal:  J Biol Chem       Date:  2009-01-28       Impact factor: 5.157

7.  The class Ib ribonucleotide reductase from Mycobacterium tuberculosis has two active R2F subunits.

Authors:  Marta Hammerstad; Asmund K Røhr; Niels H Andersen; Astrid Gräslund; Martin Högbom; K Kristoffer Andersson
Journal:  J Biol Inorg Chem       Date:  2014-03-02       Impact factor: 3.358

8.  An Iron(II)(1,3-bis(2'-pyridylimino)isoindoline) Complex as a Catalyst for Substrate Oxidation with H2O2. Evidence for a Transient Peroxodiiron(III) Species.

Authors:  József S Pap; Matthew A Cranswick; E Balogh-Hergovich; Gábor Baráth; Michel Giorgi; Gregory T Rohde; József Kaizer; Gábor Speier; Lawrence Que
Journal:  Eur J Inorg Chem       Date:  2013-08       Impact factor: 2.524

Review 9.  Assembly of nonheme Mn/Fe active sites in heterodinuclear metalloproteins.

Authors:  Julia J Griese; Vivek Srinivas; Martin Högbom
Journal:  J Biol Inorg Chem       Date:  2014-04-26       Impact factor: 3.358

10.  Phosphodeoxyribosyltransferases, designed enzymes for deoxyribonucleotides synthesis.

Authors:  Pierre Alexandre Kaminski; Gilles Labesse
Journal:  J Biol Chem       Date:  2013-01-16       Impact factor: 5.157

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