Literature DB >> 16751250

Ligand detection and discrimination by spatial relocalization: A kinase-phosphatase segregation model of TCR activation.

Nigel J Burroughs1, Zorana Lazic, P Anton van der Merwe.   

Abstract

We develop a model of tyrosine phosphorylation and activation of the T-cell receptor (TCR) by localization to regions of close membrane-membrane proximity (close contact) that physically exclude tyrosine phosphatases such as CD45. Phosphatase exclusion generates regions of low phosphatase and high kinase activity and thus our model provides a framework to examine the kinetic segregation model of TCR activation. We incorporate a sequence of activation steps modeling the construction of the signalosome with a final sequestered, or high-stability, signaling state. The residence time of unbound TCRs in tyrosine kinase-rich domains is shown to be too short for accumulation of activation steps, whereas binding to an agonist lengthens the localization time and leads to generation of fully active TCRs. Agonist detection depends only on this localization, and therefore kinetic segregation represents a viable ligand detection mechanism, or signal transduction mechanism across membranes, distinct from receptor oligomerization and conformational change. We examine the degree of discrimination of agonists from a background of null (self) peptides, and from weak agonists achievable by this mechanism.

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Year:  2006        PMID: 16751250      PMCID: PMC1544308          DOI: 10.1529/biophysj.105.080044

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

Review 1.  CD45: a critical regulator of signaling thresholds in immune cells.

Authors:  Michelle L Hermiston; Zheng Xu; Arthur Weiss
Journal:  Annu Rev Immunol       Date:  2001-12-19       Impact factor: 28.527

2.  Cutting edge: T lymphocyte activation by repeated immunological synapse formation and intermittent signaling.

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Journal:  J Immunol       Date:  2003-08-01       Impact factor: 5.422

3.  CD4 enhances T cell sensitivity to antigen by coordinating Lck accumulation at the immunological synapse.

Authors:  Qi-Jing Li; Aaron R Dinner; Shuyan Qi; Darrell J Irvine; Johannes B Huppa; Mark M Davis; Arup K Chakraborty
Journal:  Nat Immunol       Date:  2004-07-11       Impact factor: 25.606

4.  Kinetic proofreading: a new mechanism for reducing errors in biosynthetic processes requiring high specificity.

Authors:  J J Hopfield
Journal:  Proc Natl Acad Sci U S A       Date:  1974-10       Impact factor: 11.205

Review 5.  The reaction-limited kinetics of membrane-to-surface adhesion and detachment.

Authors:  M Dembo; D C Torney; K Saxman; D Hammer
Journal:  Proc R Soc Lond B Biol Sci       Date:  1988-06-22

6.  Activated TCRs remain marked for internalization after dissociation from pMHC.

Authors:  Daniel Coombs; Alexis M Kalergis; Stanley G Nathenson; Carla Wofsy; Byron Goldstein
Journal:  Nat Immunol       Date:  2002-09-09       Impact factor: 25.606

7.  Feedback control of T-cell receptor activation.

Authors:  Cliburn Chan; Jaroslav Stark; Andrew J T George
Journal:  Proc Biol Sci       Date:  2004-05-07       Impact factor: 5.349

8.  Continuous T cell receptor signaling required for synapse maintenance and full effector potential.

Authors:  Johannes B Huppa; Michael Gleimer; Cenk Sumen; Mark M Davis
Journal:  Nat Immunol       Date:  2003-07-13       Impact factor: 25.606

9.  CD45 ectodomain controls interaction with GEMs and Lck activity for optimal TCR signaling.

Authors:  Claudine Irles; Antony Symons; Frédérique Michel; Talitha R Bakker; P Anton van der Merwe; Oreste Acuto
Journal:  Nat Immunol       Date:  2002-12-23       Impact factor: 25.606

10.  The tyrosine phosphatase CD148 is excluded from the immunologic synapse and down-regulates prolonged T cell signaling.

Authors:  Joseph Lin; Arthur Weiss
Journal:  J Cell Biol       Date:  2003-08-11       Impact factor: 10.539

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  25 in total

Review 1.  Mediation of T-cell activation by actin meshworks.

Authors:  Peter Beemiller; Matthew F Krummel
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-08-11       Impact factor: 10.005

2.  A mathematical framework for analyzing T cell receptor scanning of peptides.

Authors:  Andreas Jansson
Journal:  Biophys J       Date:  2010-11-03       Impact factor: 4.033

3.  How Cells feel their environment: a focus on early dynamic events.

Authors:  Elodie Cretel; Anne Pierres; Anne-Marie Benoliel; Pierre Bongrand
Journal:  Cell Mol Bioeng       Date:  2008-03       Impact factor: 2.321

Review 4.  Systems biology in immunology: a computational modeling perspective.

Authors:  Ronald N Germain; Martin Meier-Schellersheim; Aleksandra Nita-Lazar; Iain D C Fraser
Journal:  Annu Rev Immunol       Date:  2011       Impact factor: 28.527

5.  Modulation of T cell activation by localized K⁺ accumulation at the immunological synapse--a mathematical model.

Authors:  Geoffrey V Martin; Yeoheung Yun; Laura Conforti
Journal:  J Theor Biol       Date:  2012-01-23       Impact factor: 2.691

Review 6.  Quantitative challenges in understanding ligand discrimination by alphabeta T cells.

Authors:  Ofer Feinerman; Ronald N Germain; Grégoire Altan-Bonnet
Journal:  Mol Immunol       Date:  2007-09-06       Impact factor: 4.407

7.  Mechanisms for size-dependent protein segregation at immune synapses assessed with molecular rulers.

Authors:  Juha-Matti Alakoskela; Apurba L Koner; Dominika Rudnicka; Karsten Köhler; Mark Howarth; Daniel M Davis
Journal:  Biophys J       Date:  2011-06-22       Impact factor: 4.033

Review 8.  Pairing computation with experimentation: a powerful coupling for understanding T cell signalling.

Authors:  Arup K Chakraborty; Jayajit Das
Journal:  Nat Rev Immunol       Date:  2010-01       Impact factor: 53.106

9.  TCR-pMHC kinetics under force in a cell-free system show no intrinsic catch bond, but a minimal encounter duration before binding.

Authors:  Laurent Limozin; Marcus Bridge; Pierre Bongrand; Omer Dushek; Philip Anton van der Merwe; Philippe Robert
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-17       Impact factor: 11.205

10.  A role for rebinding in rapid and reliable T cell responses to antigen.

Authors:  Omer Dushek; Raibatak Das; Daniel Coombs
Journal:  PLoS Comput Biol       Date:  2009-11-26       Impact factor: 4.475

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