Literature DB >> 16751238

Location and aggregation of the spin-labeled peptide trichogin GA IV in a phospholipid membrane as revealed by pulsed EPR.

E S Salnikov1, D A Erilov, A D Milov, Yu D Tsvetkov, C Peggion, F Formaggio, C Toniolo, J Raap, S A Dzuba.   

Abstract

The lipopeptaibol trichogin GA IV is a 10 amino acid-long residue and alpha-aminoisobutyric acid-rich antibiotic peptide of fungal origin. TOAC (2,2,6,6-tetramethylpiperidine-1-oxyl-4-amino-4-carboxylic acid) spin-labeled analogs of this membrane active peptide were investigated in hydrated bilayers of dipalmitoylphosphatidylcholine by electron spin echo envelope modulation (ESEEM) spectroscopy and pulsed electron-electron double resonance (PELDOR). Since, the ESEEM of the spin label appears to be strongly dependent on the presence of water molecules penetrated into the membrane, this phenomenon was used to study the location of this peptide in the membrane. This was achieved by comparing the ESEEM spectra for peptides labeled at different positions along the amino acid sequence with spectra known for lipids with spin labels at different positions along the hydrocarbon chain. To increase the ESEEM amplitude and to distinguish the hydrogen nuclei of water from lipid protons, membranes were hydrated with deuterated water. The PELDOR spectroscopy technique was chosen to study peptide aggregation and to determine the mutual distance distribution of the spin-labeled peptides in the membrane. The location of the peptide in the membrane and its aggregation state were found to be dependent on the peptide concentration. At a low peptide/lipid molar ratio (less than 1:100) the nonaggregated peptide chain of the trichogin molecules lie parallel to the membrane surface, with TOAC at the 4th residue located near the 9th-11th carbon positions of the sn-2 lipid chain. Increasing this ratio up to 1:20 leads to a change in peptide orientation, with the N-terminus of the peptide buried deeper into membrane. Under these conditions peptide aggregates are formed with a mean aggregate number of about N = 2. The aggregates are further characterized by a broad range of intermolecular distances (1.5-4 nm) between the labels at the N-terminal residues. The major population exhibits a distance of approximately 2.5 nm, which is of the same order as the length of the helical peptide. We suggest that the constituting monomers of the dimer are antiparallel oriented.

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Year:  2006        PMID: 16751238      PMCID: PMC1518643          DOI: 10.1529/biophysj.105.075887

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  18 in total

1.  Mechanism of membrane activity of the antibiotic trichogin GA IV: a two-state transition controlled by peptide concentration.

Authors:  Claudia Mazzuca; Lorenzo Stella; Mariano Venanzi; Fernando Formaggio; Claudio Toniolo; Basilio Pispisa
Journal:  Biophys J       Date:  2005-02-18       Impact factor: 4.033

2.  Dynamics of formation of a helix-turn-helix structure in a membrane-active peptide: a time-resolved spectroscopic study.

Authors:  Mariano Venanzi; Emanuela Gatto; Gianfranco Bocchinfuso; Antonio Palleschi; Lorenzo Stella; Fernando Formaggio; Claudio Toniolo
Journal:  Chembiochem       Date:  2006-01       Impact factor: 3.164

3.  The determination of pair distance distributions by pulsed ESR using Tikhonov regularization.

Authors:  Yun-Wei Chiang; Peter P Borbat; Jack H Freed
Journal:  J Magn Reson       Date:  2005-02       Impact factor: 2.229

4.  Ion transport across a phospholipid membrane mediated by the peptide trichogin GA IV.

Authors:  T N Kropacheva; J Raap
Journal:  Biochim Biophys Acta       Date:  2002-12-23

5.  Visualization of highly ordered striated domains induced by transmembrane peptides in supported phosphatidylcholine bilayers.

Authors:  H A Rinia; R A Kik; R A Demel; M M Snel; J A Killian; J P van Der Eerden; B de Kruijff
Journal:  Biochemistry       Date:  2000-05-16       Impact factor: 3.162

6.  The antimicrobial peptide trichogin and its interaction with phospholipid membranes.

Authors:  R F Epand; R M Epand; V Monaco; S Stoia; F Formaggio; M Crisma; C Toniolo
Journal:  Eur J Biochem       Date:  1999-12

Review 7.  Lipopeptaibols, a novel family of membrane active, antimicrobial peptides.

Authors:  C Toniolo; M Crisma; F Formaggio; C Peggion; R F Epand; R M Epand
Journal:  Cell Mol Life Sci       Date:  2001-08       Impact factor: 9.261

8.  Water concentration profiles in membranes measured by ESEEM of spin-labeled lipids.

Authors:  Denis A Erilov; Rosa Bartucci; Rita Guzzi; Alexander A Shubin; Alexander G Maryasov; Derek Marsh; Sergei A Dzuba; Luigi Sportelli
Journal:  J Phys Chem B       Date:  2005-06-23       Impact factor: 2.991

Review 9.  Trichogin: a paradigm for lipopeptaibols.

Authors:  Cristina Peggion; Fernando Formaggio; Marco Crisma; Raquel F Epand; Richard M Epand; Claudio Toniolo
Journal:  J Pept Sci       Date:  2003 Nov-Dec       Impact factor: 1.905

10.  Structure and spatial distribution of the spin-labelled lipopeptide trichogin GA IV in a phospholipid membrane studied by pulsed electron-electron double resonance (PELDOR).

Authors:  A D Milov; D A Erilov; E S Salnikov; Yu D Tsvetkov; F Formaggio; C Toniolo; J Raap
Journal:  Phys Chem Chem Phys       Date:  2005-04-21       Impact factor: 3.676

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  11 in total

1.  Structure of self-aggregated alamethicin in ePC membranes detected by pulsed electron-electron double resonance and electron spin echo envelope modulation spectroscopies.

Authors:  Alexander D Milov; Rimma I Samoilova; Yuri D Tsvetkov; Marta De Zotti; Fernando Formaggio; Claudio Toniolo; Jan-Willem Handgraaf; Jan Raap
Journal:  Biophys J       Date:  2009-04-22       Impact factor: 4.033

2.  Peptide-Membrane Interactions by Spin-Labeling EPR.

Authors:  Tatyana I Smirnova; Alex I Smirnov
Journal:  Methods Enzymol       Date:  2015-09-26       Impact factor: 1.600

3.  Conformational Changes Underlying Desensitization of the Pentameric Ligand-Gated Ion Channel ELIC.

Authors:  Monica N Kinde; Qiang Chen; Matthew J Lawless; David D Mowrey; Jiawei Xu; Sunil Saxena; Yan Xu; Pei Tang
Journal:  Structure       Date:  2015-05-07       Impact factor: 5.006

4.  Solid-state NMR paramagnetic relaxation enhancement immersion depth studies in phospholipid bilayers.

Authors:  Shidong Chu; Sergey Maltsev; A-H Emwas; Gary A Lorigan
Journal:  J Magn Reson       Date:  2010-08-24       Impact factor: 2.229

5.  Synthesis of Spin-Labeled Ibuprofen and Its Interaction with Lipid Membranes.

Authors:  Denis S Baranov; Anna S Smorygina; Sergei A Dzuba
Journal:  Molecules       Date:  2022-06-27       Impact factor: 4.927

6.  Pulsed EPR determination of water accessibility to spin-labeled amino acid residues in LHCIIb.

Authors:  A Volkov; C Dockter; T Bund; H Paulsen; G Jeschke
Journal:  Biophys J       Date:  2009-02       Impact factor: 4.033

7.  Intramembrane water associated with TOAC spin-labeled alamethicin: electron spin-echo envelope modulation by D2O.

Authors:  R Bartucci; R Guzzi; L Sportelli; D Marsh
Journal:  Biophys J       Date:  2009-02       Impact factor: 4.033

8.  Quantitative Resolution of Monomer-Dimer Populations by Inversion Modulated DEER EPR Spectroscopy.

Authors:  Thomas Schmidt; Rodolfo Ghirlando; James Baber; G Marius Clore
Journal:  Chemphyschem       Date:  2016-08-02       Impact factor: 3.102

9.  The spin label amino acid TOAC and its uses in studies of peptides: chemical, physicochemical, spectroscopic, and conformational aspects.

Authors:  Shirley Schreier; José Carlos Bozelli; Nélida Marín; Renata F F Vieira; Clóvis R Nakaie
Journal:  Biophys Rev       Date:  2012-01-21

10.  Mercury-supported biomimetic membranes for the investigation of antimicrobial peptides.

Authors:  Lucia Becucci; Rolando Guidelli
Journal:  Pharmaceuticals (Basel)       Date:  2014-01-23
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