Literature DB >> 16735412

Predicting germination response to temperature. II. Three-dimensional regression, statistical gridding and iterative-probit optimization using measured and interpolated-subpopulation data.

Stuart P Hardegree1, Adam H Winstral.   

Abstract

BACKGROUND AND AIMS: Most current thermal-germination models are parameterized with subpopulation-specific rate data, interpolated from cumulative-germination-response curves. The purpose of this study was to evaluate the relative accuracy of three-dimensional models for predicting cumulative germination response to temperature. Three-dimensional models are relatively more efficient to implement than two-dimensional models and can be parameterized directly with measured data.
METHODS: Seeds of four rangeland grass species were germinated over the constant-temperature range of 3 to 38 degrees C and monitored for subpopulation variability in germination-rate response. Models for estimating subpopulation germination rate were generated as a function of temperature using three-dimensional regression, statistical gridding and iterative-probit optimization using both measured and interpolated-subpopulation data as model inputs. KEY
RESULTS: Statistical gridding is more accurate than three-dimensional regression and iterative-probit optimization for modelling germination rate and germination time as a function of temperature and subpopulation. Optimization of the iterative-probit model lowers base-temperature estimates, relative to two-dimensional cardinal-temperature models, and results in an inability to resolve optimal-temperature coefficients as a function of subpopulation. Residual model error for the three-dimensional model was extremely high when parameterized with measured-subpopulation data. Use of measured data for model evaluation provided a more realistic estimate of predictive error than did evaluation of the larger set of interpolated-subpopulation data.
CONCLUSIONS: Statistical-gridding techniques may provide a relatively efficient method for estimating germination response in situations where the primary objective is to estimate germination time. This methodology allows for direct use of germination data for model parameterization and automates the significant computational requirements of a two-dimensional piece-wise-linear model, previously shown to produce the most accurate estimates of germination time.

Mesh:

Year:  2006        PMID: 16735412      PMCID: PMC2803456          DOI: 10.1093/aob/mcl112

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


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1.  Estimation of base temperatures for nine weed species.

Authors:  S J Steinmaus; T S Prather; J S Holt
Journal:  J Exp Bot       Date:  2000-02       Impact factor: 6.992

2.  Predicting germination response to temperature. I. Cardinal-temperature models and subpopulation-specific regression.

Authors:  Stuart P Hardegree
Journal:  Ann Bot       Date:  2006-04-19       Impact factor: 4.357

  2 in total
  3 in total

1.  Predicting germination response to temperature. III. Model validation under field-variable temperature conditions.

Authors:  Stuart P Hardegree
Journal:  Ann Bot       Date:  2006-07-25       Impact factor: 4.357

2.  BP-ANN for fitting the temperature-germination model and its application in predicting sowing time and region for Bermudagrass.

Authors:  Erxu Pi; Nitin Mantri; Sai Ming Ngai; Hongfei Lu; Liqun Du
Journal:  PLoS One       Date:  2013-12-13       Impact factor: 3.240

3.  Application of Genetic Algorithm to Predict Optimal Sowing Region and Timing for Kentucky Bluegrass in China.

Authors:  Erxu Pi; Liqun Qu; Xi Tang; Tingting Peng; Bo Jiang; Jiangfeng Guo; Hongfei Lu; Liqun Du
Journal:  PLoS One       Date:  2015-07-08       Impact factor: 3.240

  3 in total

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