Literature DB >> 1672353

A new DNA target model for track structure calculations and its first application to I-125 Auger electrons.

E Pomplun1.   

Abstract

A DNA target model has been developed, based on the geometrical co-ordinates of individual atoms. This model is used to analyse DNA damage produced by Auger electron tracks from the decay of 125I. The high resolution of this target model enables the distinction between direct and indirect electron hits, i.e. hits inside the atomic volumes of the DNA molecule and those hitting the water molecules assumed in the space between the atomic volumes. Three types of calculations have been performed: (1) the evaluation of the energy deposition in the surroundings of the decaying 125I nuclide demonstrating different fractions of direct to indirect hits at different parts of the DNA molecule (phosphate/sugar strand or bases), (2) a detailed energy deposition pattern in the radiolabelled base, indicating that this most burdened molecule is not necessarily destroyed by direct hits, and (3) a calculation of single- and double- strand breaks by using different threshold values for effective direct and indirect hits, resulting in a good correlation with experimental data on strand break efficiency.

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Year:  1991        PMID: 1672353     DOI: 10.1080/09553009114550561

Source DB:  PubMed          Journal:  Int J Radiat Biol        ISSN: 0955-3002            Impact factor:   2.694


  13 in total

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Journal:  Eur Biophys J       Date:  2004-08-06       Impact factor: 1.733

2.  The role of atomic inner shell relaxations for photon-induced DNA damage.

Authors:  Philipp Bernhardt; Werner Friedland; Herwig G Paretzke
Journal:  Radiat Environ Biophys       Date:  2004-07-02       Impact factor: 1.925

3.  Site- and energy-selective slow-electron production through intermolecular Coulombic decay.

Authors:  Kirill Gokhberg; Přemysl Kolorenč; Alexander I Kuleff; Lorenz S Cederbaum
Journal:  Nature       Date:  2013-12-22       Impact factor: 49.962

4.  Radioprobing of DNA: distribution of DNA breaks produced by decay of 125I incorporated into a triplex-forming oligonucleotide correlates with geometry of the triplex.

Authors:  I G Panyutin; R D Neumann
Journal:  Nucleic Acids Res       Date:  1997-02-15       Impact factor: 16.971

5.  Low-energy electrons inside active DNA models: a tool to elucidate the radiation action mechanisms.

Authors:  E Pomplun; M Terrissol
Journal:  Radiat Environ Biophys       Date:  1994       Impact factor: 1.925

6.  Characterization of complex apurinic/apyrimidinic-site clustering associated with an authentic site-specific radiation-induced DNA double-strand break.

Authors:  Kamal Datta; Ronald D Neumann; Thomas A Winters
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-15       Impact factor: 11.205

7.  Geometrical structures for radiation biology research as implemented in the TOPAS-nBio toolkit.

Authors:  Aimee L McNamara; José Ramos-Méndez; Joseph Perl; Kathryn Held; Naoki Dominguez; Eduardo Moreno; Nicholas T Henthorn; Karen J Kirkby; Sylvain Meylan; Carmen Villagrasa; Sebastien Incerti; Bruce Faddegon; Harald Paganetti; Jan Schuemann
Journal:  Phys Med Biol       Date:  2018-09-06       Impact factor: 3.609

8.  Simulation of (125)I decay in a synthetic oligodeoxynucleotide with normal and distorted geometry and the role of radiation and non-radiation actions.

Authors:  Wei Bo Li; Werner Friedland; Peter Jacob; Igor G Panyutin; Herwig G Paretzke
Journal:  Radiat Environ Biophys       Date:  2004-03-23       Impact factor: 1.925

Review 9.  Internal microdosimetry of alpha-emitting radionuclides.

Authors:  Werner Hofmann; Wei Bo Li; Werner Friedland; Brian W Miller; Balázs Madas; Manuel Bardiès; Imre Balásházy
Journal:  Radiat Environ Biophys       Date:  2019-12-21       Impact factor: 1.925

10.  Recent Developments on gMicroMC: Transport Simulations of Proton and Heavy Ions and Concurrent Transport of Radicals and DNA.

Authors:  Youfang Lai; Xun Jia; Yujie Chi
Journal:  Int J Mol Sci       Date:  2021-06-21       Impact factor: 5.923

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