Literature DB >> 16722765

Ultrafast solvation dynamics of human serum albumin: correlations with conformational transitions and site-selected recognition.

Weihong Qiu1, Luyuan Zhang, Oghaghare Okobiah, Yi Yang, Lijuan Wang, Dongping Zhong, Ahmed H Zewail.   

Abstract

Human serum albumin, the most abundant protein found in blood plasma, transports a great variety of ligands in the circulatory system and undergoes reversible conformational transitions over a wide range of pH values. We report here our systematic studies of solvation dynamics and local rigidity in these conformations using a single intrinsic tryptophan (W214) residue as a local molecular probe. With femtosecond resolution, we observed a robust bimodal distribution of time scales for all conformational isomers. The initial solvation occurs in several picoseconds, representing the local librational/rotational motions, followed by the dynamics, in the tens to hundreds of picoseconds, which result from the more bonded water in the tryptophan crevice. Under the physiological condition of neutral pH, we measured approximately 100 ps for the decay of the solvation correlation function and observed a large wobbling motion at the binding site that is deeply buried in a crevice, revealing the softness of the binding pocket and the large plasticity of the native structure. At acidic pH, the albumin molecule transforms to an extended conformation with a large charge distribution at the surface, and a similar temporal behavior was observed. However, at the basic pH, the protein opens the crevice and tightens its globular structure, and we observed significantly faster dynamics, 25-45 ps. These changes in the solvation dynamics are correlated with the conformational transitions and related to their structural integrity.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16722765     DOI: 10.1021/jp055989w

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  28 in total

1.  Dissection of complex protein dynamics in human thioredoxin.

Authors:  Weihong Qiu; Lijuan Wang; Wenyun Lu; Amanda Boechler; David A R Sanders; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-16       Impact factor: 11.205

2.  Measurement of solvation responses at multiple sites in a globular protein.

Authors:  Paul Abbyad; Xinghua Shi; William Childs; Tim B McAnaney; Bruce E Cohen; Steven G Boxer
Journal:  J Phys Chem B       Date:  2007-06-26       Impact factor: 2.991

3.  Translational and rotational motions of albumin sensed by a non-covalent associated porphyrin under physiological and acidic conditions: a fluorescence correlation spectroscopy and time resolved anisotropy study.

Authors:  Suzana M Andrade; Silvia M B Costa; Jan Willem Borst; Arie van Hoek; Antonie J W G Visser
Journal:  J Fluoresc       Date:  2008-02-09       Impact factor: 2.217

4.  Mapping hydration dynamics around a protein surface.

Authors:  Luyuan Zhang; Lijuan Wang; Ya-Ting Kao; Weihong Qiu; Yi Yang; Oghaghare Okobiah; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

Review 5.  Ultrafast fluorescence spectroscopy via upconversion applications to biophysics.

Authors:  Jianhua Xu; Jay R Knutson
Journal:  Methods Enzymol       Date:  2008       Impact factor: 1.600

6.  Ultrafast solvation dynamics at binding and active sites of photolyases.

Authors:  Chih-Wei Chang; Lijun Guo; Ya-Ting Kao; Jiang Li; Chuang Tan; Tanping Li; Chaitanya Saxena; Zheyun Liu; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-26       Impact factor: 11.205

7.  Bovine serum albumin oligomers in the E- and B-forms at low protein concentration and ionic strength.

Authors:  Jeremiah J Babcock; Lorenzo Brancaleon
Journal:  Int J Biol Macromol       Date:  2012-11-10       Impact factor: 6.953

8.  Implementing electrostatic polarization cannot fill the gap between experimental and theoretical measurements for the ultrafast fluorescence decay of myoglobin.

Authors:  Bingbing Lin; Ya Gao; Yongxiu Li; John Z H Zhang; Ye Mei
Journal:  J Mol Model       Date:  2014-03-27       Impact factor: 1.810

9.  Existence of different structural intermediates on the fibrillation pathway of human serum albumin.

Authors:  Josué Juárez; Pablo Taboada; Víctor Mosquera
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

10.  Validation of response function construction and probing heterogeneous protein hydration by intrinsic tryptophan.

Authors:  Yangzhong Qin; Chih-Wei Chang; Lijuan Wang; Dongping Zhong
Journal:  J Phys Chem B       Date:  2012-11-02       Impact factor: 2.991

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.