Literature DB >> 16713585

Recapitulation of short RNA-directed translational gene silencing in vitro.

Bingbing Wang1, Tara M Love, Matthew E Call, John G Doench, Carl D Novina.   

Abstract

microRNAs (miRNAs) are a large class of endogenous short RNAs that repress gene expression. Many miRNAs are conserved throughout evolution, and dysregulation of miRNA pathways has been correlated with an increasing number of human diseases. In animals, miRNAs typically bind to the 3' untranslated region (3'UTR) of target mRNAs with imperfect sequence complementarity and repress translation. Despite their importance in regulating biological processes in numerous organisms, the mechanisms of miRNA function are largely unknown. Here, we report in vitro reactions for miRNA-directed translational gene silencing. These reactions faithfully recapitulate known in vivo hallmarks of mammalian miRNA function, including a requirement for a 5' phosphate and perfect complementarity to the mRNA target in the 5' seed region. Translational gene silencing by miRNAs in vitro requires target mRNAs to possess a 7-methyl G cap and a polyA tail, whereas increasing polyA tail length alone can increase miRNA silencing activity.

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Year:  2006        PMID: 16713585     DOI: 10.1016/j.molcel.2006.03.034

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  68 in total

1.  miRNAs in human cancer.

Authors:  Xiaomin Zhong; George Coukos; Lin Zhang
Journal:  Methods Mol Biol       Date:  2012

2.  Not lost in translation: stepwise regulation of microRNA targets.

Authors:  Maja M Janas; Carl D Novina
Journal:  EMBO J       Date:  2012-04-20       Impact factor: 11.598

Review 3.  MicroRNAs and genomic instability.

Authors:  Konrad Huppi; Natalia Volfovsky; Mark Mackiewicz; Timothy Runfola; Tamara L Jones; Scott E Martin; Robert Stephens; Natasha J Caplen
Journal:  Semin Cancer Biol       Date:  2006-10-26       Impact factor: 15.707

4.  Let-7 microRNA-mediated mRNA deadenylation and translational repression in a mammalian cell-free system.

Authors:  Motoaki Wakiyama; Koji Takimoto; Osamu Ohara; Shigeyuki Yokoyama
Journal:  Genes Dev       Date:  2007-08-01       Impact factor: 11.361

Review 5.  Trading translation with RNA-binding proteins.

Authors:  Irina Abaza; Fátima Gebauer
Journal:  RNA       Date:  2008-01-22       Impact factor: 4.942

6.  Deadenylation is a widespread effect of miRNA regulation.

Authors:  Ana Eulalio; Eric Huntzinger; Tadashi Nishihara; Jan Rehwinkel; Maria Fauser; Elisa Izaurralde
Journal:  RNA       Date:  2008-11-24       Impact factor: 4.942

7.  An expanded seed sequence definition accounts for full regulation of the hid 3' UTR by bantam miRNA.

Authors:  Ali Nahvi; Christopher J Shoemaker; Rachel Green
Journal:  RNA       Date:  2009-03-12       Impact factor: 4.942

8.  Trip to ER: MicroRNA-mediated translational repression in plants.

Authors:  Xuan Ma; Xiaofeng Cao; Beixin Mo; Xuemei Chen
Journal:  RNA Biol       Date:  2013-09-10       Impact factor: 4.652

9.  Alternative RISC assembly: binding and repression of microRNA-mRNA duplexes by human Ago proteins.

Authors:  Maja M Janas; Bingbing Wang; Abigail S Harris; Mike Aguiar; Jonathan M Shaffer; Yerramilli V B K Subrahmanyam; Mark A Behlke; Kai W Wucherpfennig; Steven P Gygi; Etienne Gagnon; Carl D Novina
Journal:  RNA       Date:  2012-09-27       Impact factor: 4.942

10.  The mechanism of micro-RNA-mediated translation repression is determined by the promoter of the target gene.

Authors:  Yi Wen Kong; Ian G Cannell; Cornelia H de Moor; Kirsti Hill; Paul G Garside; Tiffany L Hamilton; Hedda A Meijer; Helen C Dobbyn; Mark Stoneley; Keith A Spriggs; Anne E Willis; Martin Bushell
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-25       Impact factor: 11.205

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