Literature DB >> 16698543

Deposition diseases and 3D domain swapping.

Melanie J Bennett1, Michael R Sawaya, David Eisenberg.   

Abstract

Protein aggregation is a feature of both normal cellular assemblies and pathological protein depositions. Although the limited order of aggregates has often impeded their structural characterization, 3D domain swapping has been implicated in the formation of several protein aggregates. Here, we review known structures displaying 3D domain swapping in the context of amyloid and related fibrils, prion proteins, and macroscopic aggregates, and we discuss the possible involvement of domain swapping in protein deposition diseases.

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Year:  2006        PMID: 16698543     DOI: 10.1016/j.str.2006.03.011

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  86 in total

1.  Structure-based optimization of designed Armadillo-repeat proteins.

Authors:  Chaithanya Madhurantakam; Gautham Varadamsetty; Markus G Grütter; Andreas Plückthun; Peer R E Mittl
Journal:  Protein Sci       Date:  2012-05-24       Impact factor: 6.725

2.  Domain swapping and amyloid fibril conformation.

Authors:  Patrick C A van der Wel
Journal:  Prion       Date:  2012-07-01       Impact factor: 3.931

3.  The impact of solubility and electrostatics on fibril formation by the H3 and H4 histones.

Authors:  Traci B Topping; Lisa M Gloss
Journal:  Protein Sci       Date:  2011-11-09       Impact factor: 6.725

4.  Anisotropy of the Coulomb interaction between folded proteins: consequences for mesoscopic aggregation of lysozyme.

Authors:  Ho Yin Chan; Vladimir Lankevich; Peter G Vekilov; Vassiliy Lubchenko
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

5.  Very few substitutions in a germ line antibody are required to initiate significant domain exchange.

Authors:  Michael Huber; Khoa M Le; Katie J Doores; Zara Fulton; Robyn L Stanfield; Ian A Wilson; Dennis R Burton
Journal:  J Virol       Date:  2010-08-11       Impact factor: 5.103

Review 6.  Serpins flex their muscle: II. Structural insights into target peptidase recognition, polymerization, and transport functions.

Authors:  James C Whisstock; Gary A Silverman; Phillip I Bird; Stephen P Bottomley; Dion Kaiserman; Cliff J Luke; Stephen C Pak; Jean-Marc Reichhart; James A Huntington
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

7.  The crystal structure of the Mycobacterium tuberculosis Rv3019c-Rv3020c ESX complex reveals a domain-swapped heterotetramer.

Authors:  Mark A Arbing; Markus Kaufmann; Tung Phan; Sum Chan; Duilio Cascio; David Eisenberg
Journal:  Protein Sci       Date:  2010-09       Impact factor: 6.725

8.  Dry amyloid fibril assembly in a yeast prion peptide is mediated by long-lived structures containing water wires.

Authors:  Govardhan Reddy; John E Straub; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-22       Impact factor: 11.205

Review 9.  The Landscape of Intertwined Associations in Homooligomeric Proteins.

Authors:  Shoshana J Wodak; Anatoly Malevanets; Stephen S MacKinnon
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

10.  Structural insights into the intertwined dimer of fyn SH2.

Authors:  Radu Huculeci; Abel Garcia-Pino; Lieven Buts; Tom Lenaerts; Nico van Nuland
Journal:  Protein Sci       Date:  2015-10-07       Impact factor: 6.725

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