Literature DB >> 16682248

Small molecule screening by imaging.

Ulrike S Eggert1, Timothy J Mitchison.   

Abstract

Useful small molecule tools can be discovered in imaging screens that measure phenotype in single cells or small organisms. Recent examples include identification of small molecule inhibitors of processes such as cell migration, cytokinesis, mitotic spindle length determination, melanogenesis, aggresome formation, membrane transport and nuclear export. Imaging screens are currently limited by challenges in the areas of image analysis and target identification. We discuss the use of model organisms such as zebrafish in screens and review different methods of target identification. The emerging field of automated image analysis is also introduced.

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Year:  2006        PMID: 16682248     DOI: 10.1016/j.cbpa.2006.04.010

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  21 in total

Review 1.  The potential of high-content high-throughput microscopy in drug discovery.

Authors:  V Starkuviene; R Pepperkok
Journal:  Br J Pharmacol       Date:  2007-07-02       Impact factor: 8.739

Review 2.  Aggresome formation and neurodegenerative diseases: therapeutic implications.

Authors:  J A Olzmann; L Li; L S Chin
Journal:  Curr Med Chem       Date:  2008       Impact factor: 4.530

3.  Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning.

Authors:  Thouis R Jones; Anne E Carpenter; Michael R Lamprecht; Jason Moffat; Serena J Silver; Jennifer K Grenier; Adam B Castoreno; Ulrike S Eggert; David E Root; Polina Golland; David M Sabatini
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-02       Impact factor: 11.205

4.  Multi-feature contour evolution for automatic live cell segmentation in time lapse imagery.

Authors:  Ilker Ersoy; Kannappan Palaniappan
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2008

5.  Single-cell attachment and culture method using a photochemical reaction in a closed microfluidic system.

Authors:  Kihoon Jang; Yan Xu; Yo Tanaka; Kae Sato; Kazuma Mawatari; Tomohiro Konno; Kazuhiko Ishihara; Takehiko Kitamori
Journal:  Biomicrofluidics       Date:  2010-09-30       Impact factor: 2.800

6.  Proper organization of microtubule minus ends is needed for midzone stability and cytokinesis.

Authors:  Shang Cai; Lesley N Weaver; Stephanie C Ems-McClung; Claire E Walczak
Journal:  Curr Biol       Date:  2010-04-29       Impact factor: 10.834

7.  Translation of DNA into a library of 13,000 synthetic small-molecule macrocycles suitable for in vitro selection.

Authors:  Brian N Tse; Thomas M Snyder; Yinghua Shen; David R Liu
Journal:  J Am Chem Soc       Date:  2008-10-29       Impact factor: 15.419

8.  Target fishing for chemical compounds using target-ligand activity data and ranking based methods.

Authors:  Nikil Wale; George Karypis
Journal:  J Chem Inf Model       Date:  2009-10       Impact factor: 4.956

9.  Introduction to the quantitative analysis of two-dimensional fluorescence microscopy images for cell-based screening.

Authors:  Vebjorn Ljosa; Anne E Carpenter
Journal:  PLoS Comput Biol       Date:  2009-12-24       Impact factor: 4.475

10.  Enhanced CellClassifier: a multi-class classification tool for microscopy images.

Authors:  Benjamin Misselwitz; Gerhard Strittmatter; Balamurugan Periaswamy; Markus C Schlumberger; Samuel Rout; Peter Horvath; Karol Kozak; Wolf-Dietrich Hardt
Journal:  BMC Bioinformatics       Date:  2010-01-14       Impact factor: 3.169

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