Literature DB >> 16674142

Atomistic simulation of solid-liquid coexistence for molecular systems: application to triazole and benzene.

David M Eike1, Edward J Maginn.   

Abstract

A method recently developed to rigorously determine solid-liquid equilibrium using a free-energy-based analysis has been extended to analyze multiatom molecular systems. This method is based on using a pseudosupercritical transformation path to reversibly transform between solid and liquid phases. Integration along this path yields the free energy difference at a single state point, which can then be used to determine the free energy difference as a function of temperature and therefore locate the coexistence temperature at a fixed pressure. The primary extension reported here is the introduction of an external potential field capable of inducing center of mass order along with secondary orientational order for molecules. The method is used to calculate the melting point of 1-H-1,2,4-triazole and benzene. Despite the fact that the triazole model gives accurate bulk densities for the liquid and crystal phases, it is found to do a poor job of reproducing the experimental crystal structure and heat of fusion. Consequently, it yields a melting point that is 100 K lower than the experimental value. On the other hand, the benzene model has been parametrized extensively to match a wide range of properties and yields a melting point that is only 20 K lower than the experimental value. Previous work in which a simple "direct heating" method was used actually found that the melting point of the benzene model was 50 K higher than the experimental value. This demonstrates the importance of using proper free energy methods to compute phase behavior. It also shows that the melting point is a very sensitive measure of force field quality that should be considered in parametrization efforts. The method described here provides a relatively simple approach for computing melting points of molecular systems.

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Year:  2006        PMID: 16674142     DOI: 10.1063/1.2188400

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

1.  Polarizable empirical force field for aromatic compounds based on the classical drude oscillator.

Authors:  Pedro E M Lopes; Guillaume Lamoureux; Benoît Roux; Alexander D Mackerell
Journal:  J Phys Chem B       Date:  2007-02-27       Impact factor: 2.991

2.  Combining MOSCED with molecular simulation free energy calculations or electronic structure calculations to develop an efficient tool for solvent formulation and selection.

Authors:  Courtney E Cox; Jeremy R Phifer; Larissa Ferreira da Silva; Gabriel Gonçalves Nogueira; Ryan T Ley; Elizabeth J O'Loughlin; Ana Karolyne Pereira Barbosa; Brett T Rygelski; Andrew S Paluch
Journal:  J Comput Aided Mol Des       Date:  2017-01-28       Impact factor: 3.686

3.  Challenges in the use of atomistic simulations to predict solubilities of drug-like molecules.

Authors:  Guilherme Duarte Ramos Matos; David L Mobley
Journal:  F1000Res       Date:  2018-05-31

4.  A Molecular Dynamics Study of Monomer Melt Properties of Cyanate Ester Monomer Melt Properties.

Authors:  Rebecca T Haber; Andrea R Browning; Bayleigh R Graves; William P Davis; Jeffrey S Wiggins
Journal:  Polymers (Basel)       Date:  2022-03-17       Impact factor: 4.329

  4 in total

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