Literature DB >> 28132112

Combining MOSCED with molecular simulation free energy calculations or electronic structure calculations to develop an efficient tool for solvent formulation and selection.

Courtney E Cox1, Jeremy R Phifer1, Larissa Ferreira da Silva1,2, Gabriel Gonçalves Nogueira1,2, Ryan T Ley1, Elizabeth J O'Loughlin1, Ana Karolyne Pereira Barbosa1,3, Brett T Rygelski1, Andrew S Paluch4.   

Abstract

Solubility parameter based methods have long been a valuable tool for solvent formulation and selection. Of these methods, the MOdified Separation of Cohesive Energy Density (MOSCED) has recently been shown to correlate well the equilibrium solubility of multifunctional non-electrolyte solids. However, before it can be applied to a novel solute, a limited amount of reference solubility data is required to regress the necessary MOSCED parameters. Here we demonstrate for the solutes methylparaben, ethylparaben, propylparaben, butylparaben, lidocaine and ephedrine how conventional molecular simulation free energy calculations or electronic structure calculations in a continuum solvent, here the SMD or SM8 solvation model, can instead be used to generate the necessary reference data, resulting in a predictive flavor of MOSCED. Adopting the melting point temperature and enthalpy of fusion of these compounds from experiment, we are able to predict equilibrium solubilities. We find the method is able to well correlate the (mole fraction) equilibrium solubility in non-aqueous solvents over four orders of magnitude with good quantitative agreement.

Entities:  

Keywords:  Activity coefficient; Chemical potential; Electronic structure; Free energy of solvation; Molecular simulation; Solubility

Mesh:

Substances:

Year:  2017        PMID: 28132112     DOI: 10.1007/s10822-016-0001-6

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  31 in total

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2.  Equilibrium free energies from nonequilibrium measurements using maximum-likelihood methods.

Authors:  Michael R Shirts; Eric Bair; Giles Hooker; Vijay S Pande
Journal:  Phys Rev Lett       Date:  2003-10-02       Impact factor: 9.161

3.  A method for computing the solubility limit of solids: application to sodium chloride in water and alcohols.

Authors:  Andrew S Paluch; Saivenkataraman Jayaraman; Jindal K Shah; Edward J Maginn
Journal:  J Chem Phys       Date:  2010-09-28       Impact factor: 3.488

4.  Self-Consistent Reaction Field Model for Aqueous and Nonaqueous Solutions Based on Accurate Polarized Partial Charges.

Authors:  Aleksandr V Marenich; Ryan M Olson; Casey P Kelly; Christopher J Cramer; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2007-11       Impact factor: 6.006

5.  Automatic atom type and bond type perception in molecular mechanical calculations.

Authors:  Junmei Wang; Wei Wang; Peter A Kollman; David A Case
Journal:  J Mol Graph Model       Date:  2006-02-03       Impact factor: 2.518

6.  Nonlinear scaling schemes for Lennard-Jones interactions in free energy calculations.

Authors:  Thomas Steinbrecher; David L Mobley; David A Case
Journal:  J Chem Phys       Date:  2007-12-07       Impact factor: 3.488

7.  Mean ionic activity coefficients in aqueous NaCl solutions from molecular dynamics simulations.

Authors:  Zoltan Mester; Athanassios Z Panagiotopoulos
Journal:  J Chem Phys       Date:  2015-01-28       Impact factor: 3.488

8.  GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit.

Authors:  Sander Pronk; Szilárd Páll; Roland Schulz; Per Larsson; Pär Bjelkmar; Rossen Apostolov; Michael R Shirts; Jeremy C Smith; Peter M Kasson; David van der Spoel; Berk Hess; Erik Lindahl
Journal:  Bioinformatics       Date:  2013-02-13       Impact factor: 6.937

9.  Predicting cyclohexane/water distribution coefficients for the SAMPL5 challenge using MOSCED and the SMD solvation model.

Authors:  Sebastian Diaz-Rodriguez; Samantha M Bozada; Jeremy R Phifer; Andrew S Paluch
Journal:  J Comput Aided Mol Des       Date:  2016-08-26       Impact factor: 3.686

10.  Transferable potentials for phase equilibria. 10. Explicit-hydrogen description of substituted benzenes and polycyclic aromatic compounds.

Authors:  Neeraj Rai; J Ilja Siepmann
Journal:  J Phys Chem B       Date:  2012-12-21       Impact factor: 2.991

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  1 in total

1.  Expanding the Solubility Parameter Method MOSCED to Pyridinium-, Quinolinium-, Pyrrolidinium-, Piperidinium-, Bicyclic-, Morpholinium-, Ammonium-, Phosphonium-, and Sulfonium-Based Ionic Liquids.

Authors:  Pratik Dhakal; Anthony R Weise; Martin C Fritsch; Cassandra M O'Dell; Andrew S Paluch
Journal:  ACS Omega       Date:  2020-02-19
  1 in total

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