Literature DB >> 16672492

Classification tree method for bacterial source tracking with antibiotic resistance analysis data.

Bertram Price1, Elichia A Venso, Mark F Frana, Joshua Greenberg, Adam Ware, Lee Currey.   

Abstract

Various statistical classification methods, including discriminant analysis, logistic regression, and cluster analysis, have been used with antibiotic resistance analysis (ARA) data to construct models for bacterial source tracking (BST). We applied the statistical method known as classification trees to build a model for BST for the Anacostia Watershed in Maryland. Classification trees have more flexibility than other statistical classification approaches based on standard statistical methods to accommodate complex interactions among ARA variables. This article describes the use of classification trees for BST and includes discussion of its principal parameters and features. Anacostia Watershed ARA data are used to illustrate the application of classification trees, and we report the BST results for the watershed.

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Year:  2006        PMID: 16672492      PMCID: PMC1472394          DOI: 10.1128/AEM.72.5.3468-3475.2006

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  9 in total

1.  Determining sources of fecal pollution in a rural Virginia watershed with antibiotic resistance patterns in fecal streptococci.

Authors:  C Hagedorn; S L Robinson; J R Filtz; S M Grubbs; T A Angier; R B Reneau
Journal:  Appl Environ Microbiol       Date:  1999-12       Impact factor: 4.792

2.  Use of antibiotic resistance analysis to identify nonpoint sources of fecal pollution.

Authors:  B A Wiggins; R W Andrews; R A Conway; C L Corr; E J Dobratz; D P Dougherty; J R Eppard; S R Knupp; M C Limjoco; J M Mettenburg; J M Rinehardt; J Sonsino; R L Torrijos; M E Zimmerman
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

3.  Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: use in predicting the source of fecal contamination in subtropical waters.

Authors:  V J Harwood; J Whitlock; V Withington
Journal:  Appl Environ Microbiol       Date:  2000-09       Impact factor: 4.792

4.  Identification of the sources of fecal coliforms in an urban watershed using antibiotic resistance analysis.

Authors:  John E Whitlock; David T Jones; Valerie J Harwood
Journal:  Water Res       Date:  2002-10       Impact factor: 11.236

5.  Use of antibiotic resistance analysis for representativeness testing of multiwatershed libraries.

Authors:  Bruce A Wiggins; Philip W Cash; Wes S Creamer; Scott E Dart; Preston P Garcia; Todd M Gerecke; Jennifer Han; Brian L Henry; Kylie B Hoover; Erika L Johnson; K C Jones; Jacquie G McCarthy; Justin A McDonough; Sarah A Mercer; Michael J Noto; Haewon Park; Matthew S Phillips; Stephanie M Purner; Brian M Smith; Erin N Stevens; Amy K Varner
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

6.  Antibiotic resistance profiles to determine sources of fecal contamination in a rural Virginia watershed.

Authors:  Alexandria K Graves; Charles Hagedorn; Alison Teetor; Michelle Mahal; Amy M Booth; Raymond B Reneau
Journal:  J Environ Qual       Date:  2002 Jul-Aug       Impact factor: 2.751

7.  Association of multiple-antibiotic-resistance profiles with point and nonpoint sources of Escherichia coli in Apalachicola Bay.

Authors:  S Parveen; R L Murphree; L Edmiston; C W Kaspar; K M Portier; M L Tamplin
Journal:  Appl Environ Microbiol       Date:  1997-07       Impact factor: 4.792

8.  Discriminant analysis of antibiotic resistance patterns in fecal streptococci, a method to differentiate human and animal sources of fecal pollution in natural waters.

Authors:  B A Wiggins
Journal:  Appl Environ Microbiol       Date:  1996-11       Impact factor: 4.792

Review 9.  Microbial source tracking: state of the science.

Authors:  Joyce M Simpson; Jorge W Santo Domingo; Donald J Reasoner
Journal:  Environ Sci Technol       Date:  2002-12-15       Impact factor: 9.028

  9 in total
  1 in total

1.  Megacities as sources for pathogenic bacteria in rivers and their fate downstream.

Authors:  Wolf-Rainer Abraham
Journal:  Int J Microbiol       Date:  2010-09-01
  1 in total

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