Literature DB >> 10966379

Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: use in predicting the source of fecal contamination in subtropical waters.

V J Harwood1, J Whitlock, V Withington.   

Abstract

The antibiotic resistance patterns of fecal streptococci and fecal coliforms isolated from domestic wastewater and animal feces were determined using a battery of antibiotics (amoxicillin, ampicillin, cephalothin, chlortetracycline, oxytetracycline, tetracycline, erythromycin, streptomycin, and vancomycin) at four concentrations each. The sources of animal feces included wild birds, cattle, chickens, dogs, pigs, and raccoons. Antibiotic resistance patterns of fecal streptococci and fecal coliforms from known sources were grouped into two separate databases, and discriminant analysis of these patterns was used to establish the relationship between the antibiotic resistance patterns and the bacterial source. The fecal streptococcus and fecal coliform databases classified isolates from known sources with similar accuracies. The average rate of correct classification for the fecal streptococcus database was 62.3%, and that for the fecal coliform database was 63.9%. The sources of fecal streptococci and fecal coliforms isolated from surface waters were identified by discriminant analysis of their antibiotic resistance patterns. Both databases identified the source of indicator bacteria isolated from surface waters directly impacted by septic tank discharges as human. At sample sites selected for relatively low anthropogenic impact, the dominant sources of indicator bacteria were identified as various animals. The antibiotic resistance analysis technique promises to be a useful tool in assessing sources of fecal contamination in subtropical waters, such as those in Florida.

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Year:  2000        PMID: 10966379      PMCID: PMC92209          DOI: 10.1128/AEM.66.9.3698-3704.2000

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  15 in total

1.  Determining sources of fecal pollution in a rural Virginia watershed with antibiotic resistance patterns in fecal streptococci.

Authors:  C Hagedorn; S L Robinson; J R Filtz; S M Grubbs; T A Angier; R B Reneau
Journal:  Appl Environ Microbiol       Date:  1999-12       Impact factor: 4.792

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Authors:  C W Kaspar; J L Burgess; I T Knight; R R Colwell
Journal:  Can J Microbiol       Date:  1990-12       Impact factor: 2.419

Review 3.  Impact of antibiotic use in animal feeding on resistance of bacterial pathogens in humans.

Authors:  W Witte
Journal:  Ciba Found Symp       Date:  1997

4.  Association of multiple-antibiotic-resistance profiles with point and nonpoint sources of Escherichia coli in Apalachicola Bay.

Authors:  S Parveen; R L Murphree; L Edmiston; C W Kaspar; K M Portier; M L Tamplin
Journal:  Appl Environ Microbiol       Date:  1997-07       Impact factor: 4.792

5.  Discriminant analysis of antibiotic resistance patterns in fecal streptococci, a method to differentiate human and animal sources of fecal pollution in natural waters.

Authors:  B A Wiggins
Journal:  Appl Environ Microbiol       Date:  1996-11       Impact factor: 4.792

6.  Evaluation of three disk tests for identification of enterococci, leuconostocs, and pediococci.

Authors:  R Facklam; N Pigott; R Franklin; J Elliott
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8.  Antimicrobial resistance of fecal coliforms from pigs in a herd not exposed to antimicrobial agents for 126 months.

Authors:  B E Langlois; K A Dawson; I Leak; D K Aaron
Journal:  Vet Microbiol       Date:  1988-10       Impact factor: 3.293

9.  The phylogenetic position of Streptococcus and Enterococcus.

Authors:  W Ludwig; E Seewaldt; R Kilpper-Bälz; K H Schleifer; L Magrum; C R Woese; G E Fox; E Stackebrandt
Journal:  J Gen Microbiol       Date:  1985-03

10.  Multiple antibiotic resistance indexing of Escherichia coli to identify high-risk sources of fecal contamination of foods.

Authors:  P H Krumperman
Journal:  Appl Environ Microbiol       Date:  1983-07       Impact factor: 4.792

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  56 in total

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Review 2.  Microbial source tracking: current methodology and future directions.

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Journal:  Appl Environ Microbiol       Date:  2002-12       Impact factor: 4.792

3.  Differentiation of fecal Escherichia coli from human, livestock, and poultry sources by rep-PCR DNA fingerprinting on the shellfish culture area of East China Sea.

Authors:  Hong-Jia Ma; Ling-Lin Fu; Jian-Rong Li
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4.  Use of antibiotic resistance analysis for representativeness testing of multiwatershed libraries.

Authors:  Bruce A Wiggins; Philip W Cash; Wes S Creamer; Scott E Dart; Preston P Garcia; Todd M Gerecke; Jennifer Han; Brian L Henry; Kylie B Hoover; Erika L Johnson; K C Jones; Jacquie G McCarthy; Justin A McDonough; Sarah A Mercer; Michael J Noto; Haewon Park; Matthew S Phillips; Stephanie M Purner; Brian M Smith; Erin N Stevens; Amy K Varner
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

5.  Comparative resistance of phage isolates of four genotypes of f-specific RNA bacteriophages to various inactivation processes.

Authors:  M Schaper; A E Durán; J Jofre
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

6.  Association of fecal indicator bacteria with human viruses and microbial source tracking markers at coastal beaches impacted by nonpoint source pollution.

Authors:  Shannon McQuaig; John Griffith; Valerie J Harwood
Journal:  Appl Environ Microbiol       Date:  2012-07-06       Impact factor: 4.792

7.  Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways.

Authors:  Matthew J Hamilton; Tao Yan; Michael J Sadowsky
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

8.  Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds.

Authors:  Satoshi Ishii; Winfried B Ksoll; Randall E Hicks; Michael J Sadowsky
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

9.  Patterns of antimicrobial resistance observed in Escherichia coli isolates obtained from domestic- and wild-animal fecal samples, human septage, and surface water.

Authors:  Raida S Sayah; John B Kaneene; Yvette Johnson; RoseAnn Miller
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

10.  Genetic characterization of Escherichia coli populations from host sources of fecal pollution by using DNA fingerprinting.

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Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

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