Literature DB >> 16672410

G8 rotavirus strains isolated in the Democratic Republic of Congo belong to the DS-1-like genogroup.

Jelle Matthijnssens1, Mustafizur Rahman, Xuelei Yang, Thomas Delbeke, Ingrid Arijs, Jean-Pierre Kabue, Jean-Jacques Tamfum Muyembe, Marc Van Ranst.   

Abstract

Several G8P[6] and G8P[8] rotavirus strains were isolated from hospitalized patients in the Democratic Republic of Congo in 2003. To investigate their overall genomic relatedness and to determine to which genogroup they belonged, the complete genomes of strains DRC88 (G8P[8]) and DRC86 (G8P[6]) were determined. Genomic comparison of these two African G8 strains revealed that 10 out of their 11 gene segments, except for VP4, were nearly identical (>98.9% identical at the nucleotide level), suggesting that this rare G8P[8] rotavirus strain originated recently from a reassortment between a common G8P[6] strain and a strain with a P[8] specificity. A very close evolutionary relationship between 9 out of the 11 gene segments of DRC88 and DRC86 and rotavirus strains belonging to the DS-1-like (G2P[4]) "genogroup" was found, and several possible reassortment events preceding the occurrence of G8P[8] and G8P[6] human rotaviruses were hypothesized. Since the genes of G2P[4] rotavirus strains are very well adapted to infect humans, the acquirement of a new VP7 (G8) gene, and especially the replacement of P[6] (believed to be of animal origin) by P[8] (most common in human rotaviruses), might make DRC88-like rotaviruses very well equipped to become a predominant human rotavirus strain and an important pathogen on the African continent and the rest of the world. These findings have important implications for rotavirus vaccine development and highlight that typing of new rotavirus strains by merely sequencing their VP7 and VP4 genes provides us with only the tip of the iceberg regarding rotavirus diversity.

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Year:  2006        PMID: 16672410      PMCID: PMC1479174          DOI: 10.1128/JCM.44.5.1801-1809.2006

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  62 in total

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Review 3.  Genetics of the rotaviruses.

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Journal:  Annu Rev Microbiol       Date:  1997       Impact factor: 15.500

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Authors:  N A Cunliffe; J S Gondwe; R L Broadhead; M E Molyneux; P A Woods; J S Bresee; R I Glass; J R Gentsch; C A Hart
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7.  Isolation of serotype G8, P6[1] bovine rotavirus from adult cattle with diarrhea.

Authors:  M Sato; T Nakagomi; K Tajima; K Ezura; H Akashi; O Nakagomi
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8.  A rearranged genomic segment 11 is common to different human rotaviruses.

Authors:  S Giambiagi; I González Rodríguez; J Gómez; O Burrone
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Authors:  G Beards; C Graham
Journal:  J Diarrhoeal Dis Res       Date:  1995-12
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  36 in total

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Journal:  J Virol       Date:  2009-11-25       Impact factor: 5.103

2.  Whole-genome analyses of DS-1-like human G2P[4] and G8P[4] rotavirus strains from Eastern, Western and Southern Africa.

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Journal:  Virus Genes       Date:  2014-06-22       Impact factor: 2.332

3.  Structural basis of rotavirus strain preference toward N-acetyl- or N-glycolylneuraminic acid-containing receptors.

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4.  Genomic characterization of a novel group A lamb rotavirus isolated in Zaragoza, Spain.

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5.  Full-genome characterization of a G8P[8] rotavirus that emerged among children with diarrhea in Croatia in 2006.

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6.  Molecular epidemic features and variation of rotavirus among children with diarrhea in Lanzhou, China, 2001-2006.

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7.  Group A human rotavirus genomics: evidence that gene constellations are influenced by viral protein interactions.

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9.  RotaC: a web-based tool for the complete genome classification of group A rotaviruses.

Authors:  Piet Maes; Jelle Matthijnssens; Mustafizur Rahman; Marc Van Ranst
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10.  Whole genome characterization of reassortant G10P[11] strain (N155) from a neonate with symptomatic rotavirus infection: identification of genes of human and animal rotavirus origin.

Authors:  Sasirekha Ramani; Miren Iturriza-Gomara; Atanu Kumar Jana; Kurien Anil Kuruvilla; James J Gray; David W Brown; Gagandeep Kang
Journal:  J Clin Virol       Date:  2009-06-07       Impact factor: 3.168

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