Literature DB >> 16670974

Evolutionary feedback mediated through population density, illustrated with viruses in chemostats.

J J Bull1, J Millstein, J Orcutt, H A Wichman.   

Abstract

A cornerstone of evolutionary ecology is that population density affects adaptation: r and K selection is the obvious example. The reverse is also appreciated: adaptation impacts population density. Yet, empirically demonstrating a direct connection between population density and adaptation is challenging. Here, we address both evolution and ecology of population density in models of viral (bacteriophage) chemostats. Chemostats supply nutrients for host cell growth, and the hosts are prey for viral reproduction. Two different chemostat designs have profoundly different consequences for viral evolution. If host and virus are confined to the same chamber, as in a predator-prey system, viral regulation of hosts feeds back to maintain low viral density (measured as infections per cell). Viral adaptation impacts host density but has a small effect on equilibrium viral density. More interesting are chemostats that supply the viral population with hosts from a virus-free refuge. Here, a type of evolutionary succession operates: adaptation at low viral density leads to higher density, but high density then favors competitive ability. Experiments support these models with both phenotypic and molecular data. Parallels to these designs exist in many natural systems, so these experimental systems may yield insights to the evolution and regulation of natural populations.

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Year:  2005        PMID: 16670974     DOI: 10.1086/499374

Source DB:  PubMed          Journal:  Am Nat        ISSN: 0003-0147            Impact factor:   3.926


  31 in total

1.  Slow fitness recovery in a codon-modified viral genome.

Authors:  J J Bull; I J Molineux; C O Wilke
Journal:  Mol Biol Evol       Date:  2012-04-24       Impact factor: 16.240

2.  Competition-colonization trade-off promotes coexistence of low-virulence viral strains.

Authors:  Samuel Ojosnegros; Edgar Delgado-Eckert; Niko Beerenwinkel
Journal:  J R Soc Interface       Date:  2012-04-18       Impact factor: 4.118

Review 3.  Viral quasispecies evolution.

Authors:  Esteban Domingo; Julie Sheldon; Celia Perales
Journal:  Microbiol Mol Biol Rev       Date:  2012-06       Impact factor: 11.056

4.  Competition-colonization dynamics: An ecology approach to quasispecies dynamics and virulence evolution in RNA viruses.

Authors:  Samuel Ojosnegros; Niko Beerenwinkel; Esteban Domingo
Journal:  Commun Integr Biol       Date:  2010-07

Review 5.  Optimality models in the age of experimental evolution and genomics.

Authors:  J J Bull; I-N Wang
Journal:  J Evol Biol       Date:  2010-07-14       Impact factor: 2.411

6.  Multiple genetic pathways to similar fitness limits during viral adaptation to a new host.

Authors:  Andre H Nguyen; Ian J Molineux; Rachael Springman; James J Bull
Journal:  Evolution       Date:  2011-09-20       Impact factor: 3.694

7.  Variable pleiotropic effects from mutations at the same locus hamper prediction of fitness from a fitness component.

Authors:  Kim M Pepin; Melanie A Samuel; Holly A Wichman
Journal:  Genetics       Date:  2005-12-15       Impact factor: 4.562

8.  Fixation probabilities when generation times are variable: the burst death model.

Authors:  J E Hubbarde; G Wild; L M Wahl
Journal:  Genetics       Date:  2007-05-04       Impact factor: 4.562

9.  Lethal mutagenesis failure may augment viral adaptation.

Authors:  Matthew L Paff; Steven P Stolte; James J Bull
Journal:  Mol Biol Evol       Date:  2013-10-03       Impact factor: 16.240

10.  Competition-colonization dynamics in an RNA virus.

Authors:  Samuel Ojosnegros; Niko Beerenwinkel; Tibor Antal; Martin A Nowak; Cristina Escarmís; Esteban Domingo
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-13       Impact factor: 11.205

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