Literature DB >> 16669626

Insights into the chemomechanical coupling of the myosin motor from simulation of its ATP hydrolysis mechanism.

Sonja M Schwarzl1, Jeremy C Smith, Stefan Fischer.   

Abstract

The molecular motor myosin converts chemical energy from ATP hydrolysis into mechanical work, thus driving a variety of essential motility processes. Although myosin function has been studied extensively, the catalytic mechanism of ATP hydrolysis and its chemomechanical coupling to the motor cycle are not completely understood. Here, the catalysis mechanism in myosin II is examined using quantum mechanical/molecular mechanical reaction path calculations. The resulting reaction pathways, found in the catalytically competent closed/closed conformation of the Switch-1/Switch-2 loops of myosin, are all associative with a pentavalent bipyramidal oxyphosphorane transition state but can vary in the activation mechanism of the attacking water molecule and in the way the hydrogens are transferred between the heavy atoms. The coordination bond between the Mg2+ metal cofactor and Ser237 in the Switch-1 loop is broken in the product state, thereby facilitating the opening of the Switch-1 loop after hydrolysis is completed, which is required for subsequent strong rebinding to actin. This reveals a key element of the chemomechanical coupling that underlies the motor cycle, namely, the modulation of actin unbinding or binding in response to the ATP or ADP x P(i) state of nucleotide-bound myosin.

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Year:  2006        PMID: 16669626     DOI: 10.1021/bi052433q

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

1.  Structural mechanism of the ATP-induced dissociation of rigor myosin from actin.

Authors:  Sebastian Kühner; Stefan Fischer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-25       Impact factor: 11.205

2.  Effects of ATP and actin-filament binding on the dynamics of the myosin II S1 domain.

Authors:  Joseph L Baker; Gregory A Voth
Journal:  Biophys J       Date:  2013-10-01       Impact factor: 4.033

3.  Kinesin Motor Enzymology: Chemistry, Structure, and Physics of Nanoscale Molecular Machines.

Authors:  J C Cochran
Journal:  Biophys Rev       Date:  2015-02-13

4.  Quantum and classical dynamics simulations of ATP hydrolysis in solution.

Authors:  Christopher B Harrison; Klaus Schulten
Journal:  J Chem Theory Comput       Date:  2012-05-21       Impact factor: 6.006

5.  Mechanochemical Function of Myosin II: Investigation into the Recovery Stroke and ATP Hydrolysis.

Authors:  Anthony P Baldo; Jil C Tardiff; Steven D Schwartz
Journal:  J Phys Chem B       Date:  2020-11-02       Impact factor: 2.991

6.  Mechanism of the myosin catalyzed hydrolysis of ATP as rationalized by molecular modeling.

Authors:  Bella L Grigorenko; Alexander V Rogov; Igor A Topol; Stanley K Burt; Hugo M Martinez; Alexander V Nemukhin
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-16       Impact factor: 11.205

7.  Regulation and Plasticity of Catalysis in Enzymes: Insights from Analysis of Mechanochemical Coupling in Myosin.

Authors:  Xiya Lu; Victor Ovchinnikov; Darren Demapan; Daniel Roston; Qiang Cui
Journal:  Biochemistry       Date:  2017-03-01       Impact factor: 3.162

8.  The hydrolysis activity of adenosine triphosphate in myosin: a theoretical analysis of anomeric effects and the nature of the transition state.

Authors:  Yang Yang; Qiang Cui
Journal:  J Phys Chem A       Date:  2009-11-12       Impact factor: 2.781

9.  Extensive conformational transitions are required to turn on ATP hydrolysis in myosin.

Authors:  Yang Yang; Haibo Yu; Qiang Cui
Journal:  J Mol Biol       Date:  2008-07-01       Impact factor: 5.469

10.  Catalytic strategy used by the myosin motor to hydrolyze ATP.

Authors:  Farooq Ahmad Kiani; Stefan Fischer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-08       Impact factor: 11.205

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