Literature DB >> 16650980

Structure of ribonuclease P--a universal ribozyme.

Alfredo Torres-Larios1, Kerren K Swinger, Tao Pan, Alfonso Mondragón.   

Abstract

Ribonuclease P (RNase P) is one of only two known universal ribozymes and was one of the first ribozymes to be discovered. It is involved in RNA processing, in particular the 5' maturation of tRNA. Unlike most other natural ribozymes, it recognizes and cleaves its substrate in trans. RNase P is a ribonucleoprotein complex containing one RNA subunit and as few as one protein subunit. It has been shown that, in bacteria and in some archaea, the RNA subunit alone can support catalysis. The structure and function of bacterial RNase P RNA have been studied extensively, but the detailed catalytic mechanism is not yet fully understood. Recently, structures of one of the structural domains and of the entire RNA component of RNase P from two different bacteria have been described. These structures provide the first atomic-level information on the structural assembly of the RNA component, and the regions involved in substrate recognition and catalysis. Comparison of these structures reveals a highly conserved core that comprises two universally conserved structural modules. Interestingly, the same structural core can be found in the context of different scaffolds.

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Year:  2006        PMID: 16650980     DOI: 10.1016/j.sbi.2006.04.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  33 in total

1.  Modular domains of the Dicistroviridae intergenic internal ribosome entry site.

Authors:  Christopher J Jang; Eric Jan
Journal:  RNA       Date:  2010-04-27       Impact factor: 4.942

2.  Substrate recognition by ribonucleoprotein ribonuclease MRP.

Authors:  Olga Esakova; Anna Perederina; Chao Quan; Igor Berezin; Andrey S Krasilnikov
Journal:  RNA       Date:  2010-12-20       Impact factor: 4.942

Review 3.  Of proteins and RNA: the RNase P/MRP family.

Authors:  Olga Esakova; Andrey S Krasilnikov
Journal:  RNA       Date:  2010-07-13       Impact factor: 4.942

4.  Structural plasticity and Mg2+ binding properties of RNase P P4 from combined analysis of NMR residual dipolar couplings and motionally decoupled spin relaxation.

Authors:  Melissa M Getz; Andy J Andrews; Carol A Fierke; Hashim M Al-Hashimi
Journal:  RNA       Date:  2006-12-28       Impact factor: 4.942

Review 5.  RNA misfolding and the action of chaperones.

Authors:  Rick Russell
Journal:  Front Biosci       Date:  2008-01-01

6.  Folding of noncoding RNAs during transcription facilitated by pausing-induced nonnative structures.

Authors:  Terrence N Wong; Tobin R Sosnick; Tao Pan
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-06       Impact factor: 11.205

7.  Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions.

Authors:  Hongbo Xie; Slobodan Vucetic; Lilia M Iakoucheva; Christopher J Oldfield; A Keith Dunker; Vladimir N Uversky; Zoran Obradovic
Journal:  J Proteome Res       Date:  2007-03-29       Impact factor: 4.466

8.  Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain.

Authors:  Anna Perederina; Olga Esakova; Chao Quan; Elena Khanova; Andrey S Krasilnikov
Journal:  EMBO J       Date:  2010-01-14       Impact factor: 11.598

Review 9.  Three-way RNA junctions with remote tertiary contacts: a recurrent and highly versatile fold.

Authors:  Marcos de la Peña; David Dufour; José Gallego
Journal:  RNA       Date:  2009-09-09       Impact factor: 4.942

10.  The aptamer core of SAM-IV riboswitches mimics the ligand-binding site of SAM-I riboswitches.

Authors:  Zasha Weinberg; Elizabeth E Regulski; Ming C Hammond; Jeffrey E Barrick; Zizhen Yao; Walter L Ruzzo; Ronald R Breaker
Journal:  RNA       Date:  2008-03-27       Impact factor: 4.942

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