Literature DB >> 16648881

Making the most of a patient's laboratory data: optimisation of signal-to-noise ratio.

Per Hyltoft Petersen1.   

Abstract

All results in laboratory medicine are compared to some reference for interpretation. This reference may be a previous result from the same patient, a reference population--either healthy or diseased, or both--or a decision limit recommended by an expert group. The aim for the medical laboratory is to improve the signal-to-noise ratio by increasing the signal or reducing the noise. This presentation deals with the more general tools for reduction of the noise component, and focuses on biological within-subject variation, reference intervals and decision models. Regarding biological within-subject variation, the estimation of reference change value (RCV) as a yardstick for judging measured differences within the patient over time is an important tool. Here, only type 1 errors are usually applied, but type 2 errors should also be taken into consideration. Moreover, variance homogeneity is assumed for the application of RCV, but this assumption is not always fulfilled, and erroneous interpretations may be introduced. A tool for comparison of different and more complicated algorithms applied to serial measurements is computer simulation (e.g. on data from tumour markers). In order to reduce the noise component from reference intervals, partitioning according to relevant subgroups is a tool, and useful criteria for judging whether subgroups should be combined are reported. Geographical and racial differences may cause different reference distributions (e.g. plasma proteins), but it has been possible to establish common reference intervals for 25 common components in Caucasians in the five Nordic countries. Transformation of data and presentation of accumulated ranked values in rankit plots where Gaussian (or log-Gaussian) distributions show up as straight lines is a valuable tool for interpretation of the distributions and comparison of subgroups. In this way it is often possible to isolate a low-risk group which fits a log-Gaussian distribution. In case of thyroid autoantibodies the distributions look biphasic, even after all possible rule-out criteria have been exhausted, but a composite model makes it possible to extract a reference population from the mixture. The classical decision model is bimodal, reflecting an assumption of two independent but overlapping distributions, with a clear but unknown prevalence for the disease. When a decision limit (cut-off point) is applied, the percentages of false positive and false negative results will be determined, but the underlying prevalence is unchanged. In contrast to this, the unimodal distributions cover a continuum of probabilities for a certain disease (risk) and the decision limit is arbitrarily chosen. Thus, the disease or risk is defined by the measured component. Consequently, the decision limit directly defines the prevalence, and this limit can be different over time and geography as has been the case for cholesterol or glucose.

Entities:  

Year:  2005        PMID: 16648881      PMCID: PMC1320174     

Source DB:  PubMed          Journal:  Clin Biochem Rev        ISSN: 0159-8090


  18 in total

1.  Objective criteria for partitioning Gaussian-distributed reference values into subgroups.

Authors:  Ari Lahti; Per Hyltoft Petersen; James C Boyd; Callum G Fraser; Nils Jørgensen
Journal:  Clin Chem       Date:  2002-02       Impact factor: 8.327

2.  Should we maintain the 95 percent reference intervals in the era of wellness testing? A concept paper.

Authors:  Lone G M Jørgensen; Ivan Brandslund; Per Hyltoft Petersen
Journal:  Clin Chem Lab Med       Date:  2004       Impact factor: 3.694

3.  Reference intervals for serum proteins: similarities and differences between adult Caucasian and Asian Indian males in Yorkshire, UK.

Authors:  A Myron Johnson; Per Hyltoft Petersen; John T Whicher; Anders Carlström; Sheila MacLennan
Journal:  Clin Chem Lab Med       Date:  2004       Impact factor: 3.694

4.  Ways of assessing quality goals for diagnostic tests in clinical situations.

Authors:  P H Petersen; M Hørder
Journal:  Arch Pathol Lab Med       Date:  1988-04       Impact factor: 5.534

5.  Assessment of CA 15.3, CEA and TPA concentrations during monitoring of breast cancer.

Authors:  G Sölétormos; P H Petersen; P Dombernowsky
Journal:  Clin Chem Lab Med       Date:  2000-05       Impact factor: 3.694

6.  Progression criteria for cancer antigen 15.3 and carcinoembryonic antigen in metastatic breast cancer compared by computer simulation of marker data.

Authors:  G Sölétormos; P Hyltoft Petersen; P Dombernowsky
Journal:  Clin Chem       Date:  2000-07       Impact factor: 8.327

7.  Interpretation of sequential measurements of cancer antigen 125 (CA 125), carcinoembryonic antigen (CEA), and tissue polypeptide antigen (TPA) based on analytical imprecision and biological variation in the monitoring of ovarian cancer.

Authors:  M K Tuxen; G Sölétormos; P H Petersen; P Dombernowsky
Journal:  Clin Chem Lab Med       Date:  2001-06       Impact factor: 3.694

8.  Diagnostic and epidemiological implications of regional differences in serum concentrations of proteins observed in six Asian cities.

Authors:  Kiyoshi Ichihara; Yoshihisa Itoh; Won-Ki Min; Sook Fan Yap; Christopher W K Lam; Xian Tao Kong; Chiung-Tei Chou; Haruo Nakamura
Journal:  Clin Chem Lab Med       Date:  2004       Impact factor: 3.694

9.  Reference change values and power functions.

Authors:  Natàlia Iglesias Canadell; Per Hyltoft Petersen; Esther Jensen; Carmen Ricós; Per E Jørgensen
Journal:  Clin Chem Lab Med       Date:  2004-04       Impact factor: 3.694

10.  On the calculation of a "reference change" for comparing two consecutive measurements.

Authors:  E K Harris; T Yasaka
Journal:  Clin Chem       Date:  1983-01       Impact factor: 8.327

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