Literature DB >> 16646048

Automated fluorescent in situ hybridization (FISH) analysis of t(9;22)(q34;q11) in interphase nuclei.

Béla Kajtár1, Gábor Méhes, Thomas Lörch, Linda Deák, Marika Kneifné, Donát Alpár, László Pajor.   

Abstract

BACKGROUND: For chronic myeloid leukemia, the FISH detection of t(9;22)(q34;q11) in interphase nuclei of peripheral leukocytes is an alternative method to bone marrow karyotyping for monitoring treatment. With automation, several drawbacks of manual analysis may be circumvented. In this article, the capabilities of a commercially available automated image acquisition and analysis system were determined by detecting t(9;22)(q34;q11) in interphase nuclei of peripheral leukocytes.
METHODS: Three peripheral blood samples of normal adults, 21 samples of CML patients, and one sample of a t(9;22)(q34;q11) positive cell-line were used.
RESULTS: Single nuclei with correctly detected signals amounted to 99.6% of nuclei analyzed after exclusion of overlapping nuclei and nuclei with incorrect signal detection. A cut-off value of 0.84 mum was defined to discriminate between translocation positive and negative nuclei based on the shortest distance between signals. Using this value, the false positive rate of the automated analysis for negative samples was 7.0%, whereas that of the manual analysis was 5.8%. Automated and manual results showed strong correlation (R(2) = 0.985), the mean difference of results was only 3.7%.
CONCLUSIONS: A reliable and objective automated analysis of large numbers of cells is possible, avoiding interobserver variability and producing statistically more accurate results than manual evaluation. Copyright 2006 International Society for Analytical Cytology.

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Year:  2006        PMID: 16646048     DOI: 10.1002/cyto.a.20260

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.355


  9 in total

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2.  Automated analysis of fluorescent in situ hybridization (FISH) labeled genetic biomarkers in assisting cervical cancer diagnosis.

Authors:  Xingwei Wang; Bin Zheng; Roy R Zhang; Shibo Li; Xiaodong Chen; John J Mulvihill; Xianglan Lu; Hui Pang; Hong Liu
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Journal:  J Biomed Biotechnol       Date:  2011-03-13

4.  Intelligent screening systems for cervical cancer.

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Journal:  ScientificWorldJournal       Date:  2014-05-11

5.  Investigation of CPD and HMDS sample preparation techniques for cervical cells in developing computer-aided screening system based on FE-SEM/EDX.

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6.  Automated 3D scoring of fluorescence in situ hybridization (FISH) using a confocal whole slide imaging scanner.

Authors:  Ziv Frankenstein; Naohiro Uraoka; Umut Aypar; Ruth Aryeequaye; Mamta Rao; Meera Hameed; Yanming Zhang; Yukako Yagi
Journal:  Appl Microsc       Date:  2021-04-09

7.  Automated detection of residual cells after sex-mismatched stem-cell transplantation - evidence for presence of disease-marker negative residual cells.

Authors:  Jörn Erlecke; Isabell Hartmann; Martin Hoffmann; Torsten Kroll; Heike Starke; Anita Heller; Alexander Gloria; Herbert G Sayer; Tilman Johannes; Uwe Claussen; Thomas Liehr; Ivan F Loncarevic
Journal:  Mol Cytogenet       Date:  2009-05-29       Impact factor: 2.009

8.  Feature selection for the automated detection of metaphase chromosomes: performance comparison using a receiver operating characteristic method.

Authors:  Yuchen Qiu; Jie Song; Xianglan Lu; Yuhua Li; Bin Zheng; Shibo Li; Hong Liu
Journal:  Anal Cell Pathol (Amst)       Date:  2014-11-11       Impact factor: 2.916

9.  Fluorescence in situ hybridization (FISH): an increasingly demanded tool for biomarker research and personalized medicine.

Authors:  Linping Hu; Kun Ru; Li Zhang; Yuting Huang; Xiaofan Zhu; Hanzhi Liu; Anders Zetterberg; Tao Cheng; Weimin Miao
Journal:  Biomark Res       Date:  2014-02-05
  9 in total

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