Literature DB >> 16644065

Computational approaches for predicting CYP-related metabolism properties in the screening of new drugs.

P Crivori1, I Poggesi.   

Abstract

The site of biotransformation, the extent and rate of metabolism and the number of active metabolic pathways are among the most important characteristics of the pharmacokinetics of a drug. The catalytic activity of drug metabolizing enzymes is likely the most influential determinant of the pharmacokinetic variability. Metabolic stability is the prerequisite for sustaining the therapeutically relevant concentrations. Metabolic inhibition and induction can give rise to clinically important drug-drug interactions. A variety of computational approaches are currently available for predicting different cytochrome P450 (CYP)-related metabolism endpoints. The present review will describe these approaches and their impact on drug development process. Indications on the available software for the implementation will also be given.

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Year:  2006        PMID: 16644065     DOI: 10.1016/j.ejmech.2006.03.003

Source DB:  PubMed          Journal:  Eur J Med Chem        ISSN: 0223-5234            Impact factor:   6.514


  11 in total

1.  Combined use of pharmacophoric models together with drug metabolism and genotoxicity "in silico" studies in the hit finding process.

Authors:  Ma José Jerez; Miguel Jerez; Coral González-García; Sara Ballester; Ana Castro
Journal:  J Comput Aided Mol Des       Date:  2013-01-08       Impact factor: 3.686

2.  SMARTCyp: A 2D Method for Prediction of Cytochrome P450-Mediated Drug Metabolism.

Authors:  Patrik Rydberg; David E Gloriam; Jed Zaretzki; Curt Breneman; Lars Olsen
Journal:  ACS Med Chem Lett       Date:  2010-03-15       Impact factor: 4.345

3.  Potentially increasing the metabolic stability of drug candidates via computational site of metabolism prediction by CYP2C9: The utility of incorporating protein flexibility via an ensemble of structures.

Authors:  Matthew L Danielson; Prashant V Desai; Michael A Mohutsky; Steven A Wrighton; Markus A Lill
Journal:  Eur J Med Chem       Date:  2011-06-23       Impact factor: 6.514

4.  RS-predictor: a new tool for predicting sites of cytochrome P450-mediated metabolism applied to CYP 3A4.

Authors:  Jed Zaretzki; Charles Bergeron; Patrik Rydberg; Tao-wei Huang; Kristin P Bennett; Curt M Breneman
Journal:  J Chem Inf Model       Date:  2011-06-15       Impact factor: 4.956

5.  Prediction of cytochrome P450 isoform responsible for metabolizing a drug molecule.

Authors:  Nitish K Mishra; Sandhya Agarwal; Gajendra Ps Raghava
Journal:  BMC Pharmacol       Date:  2010-07-16

Review 6.  Current industrial practices in assessing CYP450 enzyme induction: preclinical and clinical.

Authors:  Michael Sinz; Gillian Wallace; Jasminder Sahi
Journal:  AAPS J       Date:  2008-08-07       Impact factor: 4.009

7.  Predicting Mouse Liver Microsomal Stability with "Pruned" Machine Learning Models and Public Data.

Authors:  Alexander L Perryman; Thomas P Stratton; Sean Ekins; Joel S Freundlich
Journal:  Pharm Res       Date:  2015-09-28       Impact factor: 4.200

8.  Combining structure- and ligand-based approaches to improve site of metabolism prediction in CYP2C9 substrates.

Authors:  Laura J Kingsley; Gregory L Wilson; Morgan E Essex; Markus A Lill
Journal:  Pharm Res       Date:  2014-09-11       Impact factor: 4.200

9.  A Novel N-Tert-Butyl Derivatives of Pseudothiohydantoin as Potential Target in Anti-Cancer Therapy.

Authors:  Daria Kupczyk; Renata Studzińska; Szymon Baumgart; Rafał Bilski; Tomasz Kosmalski; Renata Kołodziejska; Alina Woźniak
Journal:  Molecules       Date:  2021-04-29       Impact factor: 4.411

Review 10.  Membrane transporter proteins: a challenge for CNS drug development.

Authors:  François Girardin
Journal:  Dialogues Clin Neurosci       Date:  2006       Impact factor: 5.986

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