Literature DB >> 16632608

Binding of 5'-GTP to the C-terminal FeS cluster of the radical S-adenosylmethionine enzyme MoaA provides insights into its mechanism.

Petra Hänzelmann1, Hermann Schindelin.   

Abstract

The first step in molybdenum cofactor biosynthesis, the conversion of 5'-GTP to precursor Z, an oxygen-sensitive tetrahydropyranopterin is catalyzed by the S-adenosylmethionine (SAM)-dependent enzyme MoaA and the accessory protein MoaC. This reaction involves the radical-initiated intramolecular rearrangement of the guanine C8 atom. MoaA harbors an N-terminal [4Fe-4S] cluster, which is involved in the reductive cleavage of SAM and generates a 5'-deoxyadenosyl radical (5'-dA*), and a C-terminal [4Fe-4S] cluster presumably involved in substrate binding and/or activation. Biochemical studies identified residues involved in 5'-GTP binding and the determinants of nucleotide specificity. The crystal structure of MoaA in complex with 5'-GTP confirms the biochemical data and provides valuable insights into the subsequent radical reaction. MoaA binds 5'-GTP with high affinity and interacts through its C-terminal [4Fe-4S] cluster with the guanine N1 and N2 atoms, in a yet uncharacterized binding mode. The tightly anchored triphosphate moiety prevents the escape of radical intermediates. This structure also visualizes the L-Met and 5'-dA cleavage products of SAM. Rotation of the 5'-dA ribose and/or conformational changes of the guanosine are proposed to bring the 5'-deoxyadenosyl radical into close proximity of either the ribose C2' and C3' or the guanine C8 carbon atoms leading to hydrogen abstraction.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16632608      PMCID: PMC1458979          DOI: 10.1073/pnas.0510711103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

Review 1.  Genetics of molybdenum cofactor deficiency.

Authors:  J Reiss
Journal:  Hum Genet       Date:  2000-02       Impact factor: 4.132

2.  Ironminus signSulfur Proteins with Nonredox Functions.

Authors:  Dennis H. Flint; Ronda M. Allen
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

3.  Aconitase as Ironminus signSulfur Protein, Enzyme, and Iron-Regulatory Protein.

Authors:  Helmut Beinert; Mary Claire Kennedy; C. David Stout
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

4.  Probing the energetic and structural role of amino acid/nucleobase cation-pi interactions in protein-ligand complexes.

Authors:  Christophe Biot; Eric Buisine; Jean-Marc Kwasigroch; René Wintjens; Marianne Rooman
Journal:  J Biol Chem       Date:  2002-08-06       Impact factor: 5.157

Review 5.  Structural biology of enzymes involved in NAD and molybdenum cofactor biosynthesis.

Authors:  Menico Rizzi; Hermann Schindelin
Journal:  Curr Opin Struct Biol       Date:  2002-12       Impact factor: 6.809

6.  Histidine 179 mutants of GTP cyclohydrolase I catalyze the formation of 2-amino-5-formylamino-6-ribofuranosylamino-4(3H)-pyrimidinone triphosphate.

Authors:  A Bracher; M Fischer; W Eisenreich; H Ritz; N Schramek; P Boyle; P Gentili; R Huber; H Nar; G Auerbach; A Bacher
Journal:  J Biol Chem       Date:  1999-06-11       Impact factor: 5.157

Review 7.  Adenosylmethionine-dependent iron-sulfur enzymes: versatile clusters in a radical new role.

Authors:  J Cheek; J B Broderick
Journal:  J Biol Inorg Chem       Date:  2001-03       Impact factor: 3.358

8.  Use of TLS parameters to model anisotropic displacements in macromolecular refinement.

Authors:  M D Winn; M N Isupov; G N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-01

Review 9.  Iron-sulfur proteins: ancient structures, still full of surprises.

Authors:  H Beinert
Journal:  J Biol Inorg Chem       Date:  2000-02       Impact factor: 3.358

10.  Functionality of alternative splice forms of the first enzymes involved in human molybdenum cofactor biosynthesis.

Authors:  Petra Hänzelmann; Gunter Schwarz; Ralf R Mendel
Journal:  J Biol Chem       Date:  2002-03-12       Impact factor: 5.157

View more
  79 in total

1.  The radical SAM enzyme AlbA catalyzes thioether bond formation in subtilosin A.

Authors:  Leif Flühe; Thomas A Knappe; Michael J Gattner; Antje Schäfer; Olaf Burghaus; Uwe Linne; Mohamed A Marahiel
Journal:  Nat Chem Biol       Date:  2012-02-26       Impact factor: 15.040

2.  Iron-Dependent Regulation of Molybdenum Cofactor Biosynthesis Genes in Escherichia coli.

Authors:  Arkadiusz Zupok; Michal Gorka; Beata Siemiatkowska; Aleksandra Skirycz; Silke Leimkühler
Journal:  J Bacteriol       Date:  2019-08-08       Impact factor: 3.490

Review 3.  Cofactor biosynthesis--still yielding fascinating new biological chemistry.

Authors:  Tadhg P Begley; Abhishek Chatterjee; Jeremiah W Hanes; Amrita Hazra; Steven E Ealick
Journal:  Curr Opin Chem Biol       Date:  2008-04-02       Impact factor: 8.822

Review 4.  Control of radical chemistry in the AdoMet radical enzymes.

Authors:  Kaitlin S Duschene; Susan E Veneziano; Sunshine C Silver; Joan B Broderick
Journal:  Curr Opin Chem Biol       Date:  2009-03-09       Impact factor: 8.822

5.  X-ray and EPR Characterization of the Auxiliary Fe-S Clusters in the Radical SAM Enzyme PqqE.

Authors:  Ian Barr; Troy A Stich; Anthony S Gizzi; Tyler L Grove; Jeffrey B Bonanno; John A Latham; Tyler Chung; Carrie M Wilmot; R David Britt; Steven C Almo; Judith P Klinman
Journal:  Biochemistry       Date:  2018-02-06       Impact factor: 3.162

6.  ENDOR spectroscopy shows that guanine N1 binds to [4Fe-4S] cluster II of the S-adenosylmethionine-dependent enzyme MoaA: mechanistic implications.

Authors:  Nicholas S Lees; Petra Hänzelmann; Heather L Hernandez; Sowmya Subramanian; Hermann Schindelin; Michael K Johnson; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2009-07-08       Impact factor: 15.419

7.  Reconstitution and substrate specificity for isopentenyl pyrophosphate of the antiviral radical SAM enzyme viperin.

Authors:  Arpita Chakravarti; Kiruthika Selvadurai; Rezvan Shahoei; Hugo Lee; Shirin Fatma; Emad Tajkhorshid; Raven H Huang
Journal:  J Biol Chem       Date:  2018-07-20       Impact factor: 5.157

8.  X-ray analysis of butirosin biosynthetic enzyme BtrN redefines structural motifs for AdoMet radical chemistry.

Authors:  Peter J Goldman; Tyler L Grove; Squire J Booker; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-18       Impact factor: 11.205

9.  Post-translational modification of ribosomal proteins: structural and functional characterization of RimO from Thermotoga maritima, a radical S-adenosylmethionine methylthiotransferase.

Authors:  Simon Arragain; Ricardo Garcia-Serres; Geneviève Blondin; Thierry Douki; Martin Clemancey; Jean-Marc Latour; Farhad Forouhar; Helen Neely; Gaetano T Montelione; John F Hunt; Etienne Mulliez; Marc Fontecave; Mohamed Atta
Journal:  J Biol Chem       Date:  2009-12-09       Impact factor: 5.157

10.  Mechanistic Investigation of cPMP Synthase in Molybdenum Cofactor Biosynthesis Using an Uncleavable Substrate Analogue.

Authors:  Bradley M Hover; Edward A Lilla; Kenichi Yokoyama
Journal:  Biochemistry       Date:  2015-12-01       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.