Literature DB >> 16629396

Advances in fluorescent tracking of nucleic acids in living cells.

Roeland W Dirks1, Hans J Tanke.   

Abstract

Nucleic acids are typically detected in morphologically preserved fixed cells and tissues using in situ hybridization techniques. This review discusses a variety of established and more challenging fluorescence-based methods for the detection and tracking of DNA or RNA sequences in living cells. Over the past few years, various fluorescent in vivo labeling methods have been developed, and dedicated microscope and image analysis tools have been designed. These advances in technologies indicate that live-cell imaging of nucleic acids is likely to become a standard research tool for understanding genome organization and gene expression regulation in the near future. Recent live-cell imaging studies have already provided important insights into the dynamic behaviors of chromatin and RNAs in the cell.

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Year:  2006        PMID: 16629396     DOI: 10.2144/000112121

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  17 in total

Review 1.  Imaging intracellular RNA distribution and dynamics in living cells.

Authors:  Sanjay Tyagi
Journal:  Nat Methods       Date:  2009-05       Impact factor: 28.547

2.  DNA/RNA Fluorescence Imaging by Synthetic Nucleic Acids.

Authors:  Akimitsu Okamoto
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

3.  Combining SELEX screening and rational design to develop light-up fluorophore-RNA aptamer pairs for RNA tagging.

Authors:  Jungjoon Lee; Kyung Hyun Lee; Jongho Jeon; Anca Dragulescu-Andrasi; Fei Xiao; Jianghong Rao
Journal:  ACS Chem Biol       Date:  2010-11-19       Impact factor: 5.100

Review 4.  Fluorescent probes for live-cell RNA detection.

Authors:  Gang Bao; Won Jong Rhee; Andrew Tsourkas
Journal:  Annu Rev Biomed Eng       Date:  2009       Impact factor: 9.590

5.  Comparison of superparamagnetic and ultrasmall superparamagnetic iron oxide cell labeling for tracking green fluorescent protein gene marker with negative and positive contrast magnetic resonance imaging.

Authors:  Zhuoli Zhang; Rohan Dharmakumar; Nicole Mascheri; Zhaoyang Fan; Shengyong Wu; Debiao Li
Journal:  Mol Imaging       Date:  2009 May-Jun       Impact factor: 4.488

Review 6.  Imaging beyond the proteome.

Authors:  Pamela V Chang; Carolyn R Bertozzi
Journal:  Chem Commun (Camb)       Date:  2012-07-17       Impact factor: 6.222

7.  The carnegie protein trap library: a versatile tool for Drosophila developmental studies.

Authors:  Michael Buszczak; Shelley Paterno; Daniel Lighthouse; Julia Bachman; Jamie Planck; Stephenie Owen; Andrew D Skora; Todd G Nystul; Benjamin Ohlstein; Anna Allen; James E Wilhelm; Terence D Murphy; Robert W Levis; Erika Matunis; Nahathai Srivali; Roger A Hoskins; Allan C Spradling
Journal:  Genetics       Date:  2006-12-28       Impact factor: 4.562

8.  Real time monitoring of endogenous cytoplasmic mRNA using linear antisense 2'-O-methyl RNA probes in living cells.

Authors:  Kohki Okabe; Yoshie Harada; Junwei Zhang; Hisashi Tadakuma; Tokio Tani; Takashi Funatsu
Journal:  Nucleic Acids Res       Date:  2010-11-23       Impact factor: 16.971

9.  Using AIE Luminogen for Long-term and Low-background Three-Photon Microscopic Functional Bioimaging.

Authors:  Zhenfeng Zhu; Chris W T Leung; Xinyuan Zhao; Yalun Wang; Jun Qian; Ben Zhong Tang; Sailing He
Journal:  Sci Rep       Date:  2015-10-15       Impact factor: 4.379

10.  Quantitative comparison of DNA detection by GFP-lac repressor tagging, fluorescence in situ hybridization and immunostaining.

Authors:  Il-Han Kim; Jens Nagel; Simone Otten; Boris Knerr; Roland Eils; Karl Rohr; Steffen Dietzel
Journal:  BMC Biotechnol       Date:  2007-12-20       Impact factor: 2.563

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