Literature DB >> 16627658

Porphyrobacter dokdonensis sp. nov., isolated from sea water.

Jung-Hoon Yoon1, So-Jung Kang1, Mi-Hwa Lee1, Hyun Woo Oh1, Tae-Kwang Oh1.   

Abstract

A Gram-negative, non-motile, non-spore-forming, slightly halophilic bacterial strain, DSW-74T, was isolated from sea water off the island of Dokdo, Korea, and its taxonomic position was investigated by a polyphasic study. Strain DSW-74T grew optimally at 37 degrees C and in the presence of 2 % (w/v) NaCl. It contained Q-10 as the predominant ubiquinone and C17 : 1omega6c and C18 : 1omega7c as the major fatty acids. Its DNA G+C content was 65.8 mol%. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain DSW-74T was most closely related to Porphyrobacter species. Similarity values between the 16S rRNA gene sequence of strain DSW-74T and those of the type strains of recognized Porphyrobacter species and of Erythromicrobium ramosum were in the range 97.4-98.7 %. Strain DSW-74T exhibited 16S rRNA gene sequence similarity values of <97.5 % to recognized Erythrobacter species and the other species used in the phylogenetic analysis. DNA-DNA relatedness levels and differential phenotypic properties made it possible to categorize strain DSW-74T as representing a novel Porphyrobacter species. On the basis of the taxonomic data presented, it is proposed that DSW-74T (=KCTC 12395T=DSM 17193T) should be classified in the genus Porphyrobacter as the type strain of a novel species, Porphyrobacter dokdonensis sp. nov.

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Year:  2006        PMID: 16627658     DOI: 10.1099/ijs.0.63840-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  8 in total

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Journal:  J Microbiol       Date:  2014-08-27       Impact factor: 3.422

2.  Genome Sequence of Porphyrobacter dokdonensis DSW-74T, Isolated from Seawater off Dokdo in the East Sea (Sea of Korea).

Authors:  Ju Yeon Song; Juhye Hong; Min-Jung Kwak; Soon-Kyeong Kwon; Jihyun F Kim
Journal:  Genome Announc       Date:  2016-09-01

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Journal:  BMC Genomics       Date:  2018-05-23       Impact factor: 3.969

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Journal:  Int J Syst Evol Microbiol       Date:  2020-07-29       Impact factor: 2.747

5.  Complex Evolution of Light-Dependent Protochlorophyllide Oxidoreductases in Aerobic Anoxygenic Phototrophs: Origin, Phylogeny, and Function.

Authors:  Olga Chernomor; Lena Peters; Judith Schneidewind; Anita Loeschcke; Esther Knieps-Grünhagen; Fabian Schmitz; Eric von Lieres; Roger Jan Kutta; Vera Svensson; Karl-Erich Jaeger; Thomas Drepper; Arndt von Haeseler; Ulrich Krauss
Journal:  Mol Biol Evol       Date:  2021-03-09       Impact factor: 16.240

6.  Whole-genome sequence of a freshwater aerobic anoxygenic phototroph, Porphyrobacter sp. strain AAP82, isolated from the Huguangyan Maar Lake in Southern China.

Authors:  Xiuling Li; Michal Koblízek; Fuying Feng; Yunxu Li; Jichang Jian; Yonghui Zeng
Journal:  Genome Announc       Date:  2013-03-07

7.  Planktonic and sedimentary bacterial diversity of Lake Sayram in summer.

Authors:  Lei Fang; Lei Chen; Yuan Liu; Wei Tao; Zhongzhe Zhang; Haiying Liu; Yong Tang
Journal:  Microbiologyopen       Date:  2015-08-03       Impact factor: 3.139

8.  Porphyrobacter mercurialis sp. nov., isolated from a stadium seat and emended description of the genus Porphyrobacter.

Authors:  David A Coil; Jennifer C Flanagan; Andrew Stump; Alexandra Alexiev; Jenna M Lang; Jonathan A Eisen
Journal:  PeerJ       Date:  2015-11-12       Impact factor: 2.984

  8 in total

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