Literature DB >> 16626300

The RNA polymerase I transcription machinery.

Jackie Russell1, Joost C B M Zomerdijk.   

Abstract

The rRNAs constitute the catalytic and structural components of the ribosome, the protein synthesis machinery of cells. The level of rRNA synthesis, mediated by Pol I (RNA polymerase I), therefore has a major impact on the life and destiny of a cell. In order to elucidate how cells achieve the stringent control of Pol I transcription, matching the supply of rRNA to demand under different cellular growth conditions, it is essential to understand the components and mechanics of the Pol I transcription machinery. In this review, we discuss: (i) the molecular composition and functions of the Pol I enzyme complex and the two main Pol I transcription factors, SL1 (selectivity factor 1) and UBF (upstream binding factor); (ii) the interplay between these factors during pre-initiation complex formation at the rDNA promoter in mammalian cells; and (iii) the cellular control of the Pol I transcription machinery.

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Year:  2006        PMID: 16626300      PMCID: PMC3858827          DOI: 10.1042/bss0730203

Source DB:  PubMed          Journal:  Biochem Soc Symp        ISSN: 0067-8694


  97 in total

1.  Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution.

Authors:  A L Gnatt; P Cramer; J Fu; D A Bushnell; R D Kornberg
Journal:  Science       Date:  2001-04-19       Impact factor: 47.728

Review 2.  At the crossroads of growth control; making ribosomal RNA.

Authors:  Tom Moss
Journal:  Curr Opin Genet Dev       Date:  2004-04       Impact factor: 5.578

Review 3.  Mechanism of RNA polymerase I transcription.

Authors:  Lucio Comai
Journal:  Adv Protein Chem       Date:  2004

Review 4.  Regulation of RNA polymerase I transcription in yeast and vertebrates.

Authors:  R H Reeder
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1999

5.  Functional cooperativity between transcription factors UBF1 and SL1 mediates human ribosomal RNA synthesis.

Authors:  S P Bell; R M Learned; H M Jantzen; R Tjian
Journal:  Science       Date:  1988-09-02       Impact factor: 47.728

6.  The RNA polymerase I transcription factor xUBF contains 5 tandemly repeated HMG homology boxes.

Authors:  D Bachvarov; T Moss
Journal:  Nucleic Acids Res       Date:  1991-05-11       Impact factor: 16.971

7.  Rrn3 becomes inactivated in the process of ribosomal DNA transcription.

Authors:  Iwona Hirschler-Laszkiewicz; Alice H Cavanaugh; Ayoub Mirza; Mingyue Lun; Qiyue Hu; Tom Smink; Lawrence I Rothblum
Journal:  J Biol Chem       Date:  2003-03-19       Impact factor: 5.157

8.  The RNA polymerase I transcription factor UBF is a sequence-tolerant HMG-box protein that can recognize structured nucleic acids.

Authors:  G P Copenhaver; C D Putnam; M L Denton; C S Pikaard
Journal:  Nucleic Acids Res       Date:  1994-07-11       Impact factor: 16.971

9.  Epidermal growth factor enhances cellular TATA binding protein levels and induces RNA polymerase I- and III-dependent gene activity.

Authors:  Shuping Zhong; Cheng Zhang; Deborah L Johnson
Journal:  Mol Cell Biol       Date:  2004-06       Impact factor: 4.272

10.  Recognition of the Xenopus ribosomal core promoter by the transcription factor xUBF involves multiple HMG box domains and leads to an xUBF interdomain interaction.

Authors:  B Leblanc; C Read; T Moss
Journal:  EMBO J       Date:  1993-02       Impact factor: 11.598

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  70 in total

Review 1.  MYC as a regulator of ribosome biogenesis and protein synthesis.

Authors:  Jan van Riggelen; Alper Yetil; Dean W Felsher
Journal:  Nat Rev Cancer       Date:  2010-04       Impact factor: 60.716

2.  Protein kinase Cι promotes UBF1-ECT2 binding on ribosomal DNA to drive rRNA synthesis and transformed growth of non-small-cell lung cancer cells.

Authors:  Verline Justilien; Kayla C Lewis; Kayleah M Meneses; Lee Jamieson; Nicole R Murray; Alan P Fields
Journal:  J Biol Chem       Date:  2020-04-29       Impact factor: 5.157

3.  RNA polymerase transcription machinery in trypanosomes.

Authors:  Anish Das; Mahrukh Banday; Vivian Bellofatto
Journal:  Eukaryot Cell       Date:  2007-10-19

4.  The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I.

Authors:  Sousuke Imamura; Mitsumasa Hanaoka; Kan Tanaka
Journal:  EMBO J       Date:  2008-09-03       Impact factor: 11.598

5.  CRM1 and its ribosome export adaptor NMD3 localize to the nucleolus and affect rRNA synthesis.

Authors:  Baoyan Bai; Henna M Moore; Marikki Laiho
Journal:  Nucleus       Date:  2013-06-12       Impact factor: 4.197

Review 6.  The nucleolus—guardian of cellular homeostasis and genome integrity.

Authors:  Ingrid Grummt
Journal:  Chromosoma       Date:  2013-12       Impact factor: 4.316

7.  Crystal structure of the 14-subunit RNA polymerase I.

Authors:  Carlos Fernández-Tornero; María Moreno-Morcillo; Umar J Rashid; Nicholas M I Taylor; Federico M Ruiz; Tim Gruene; Pierre Legrand; Ulrich Steuerwald; Christoph W Müller
Journal:  Nature       Date:  2013-10-23       Impact factor: 49.962

8.  A targeting modality for destruction of RNA polymerase I that possesses anticancer activity.

Authors:  Karita Peltonen; Laureen Colis; Hester Liu; Rishi Trivedi; Michael S Moubarek; Henna M Moore; Baoyan Bai; Michelle A Rudek; Charles J Bieberich; Marikki Laiho
Journal:  Cancer Cell       Date:  2014-01-13       Impact factor: 31.743

9.  Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules.

Authors:  Katharina Merz; Maria Hondele; Hannah Goetze; Katharina Gmelch; Ulrike Stoeckl; Joachim Griesenbeck
Journal:  Genes Dev       Date:  2008-05-01       Impact factor: 11.361

Review 10.  Dysregulation of the basal RNA polymerase transcription apparatus in cancer.

Authors:  Megan J Bywater; Richard B Pearson; Grant A McArthur; Ross D Hannan
Journal:  Nat Rev Cancer       Date:  2013-05       Impact factor: 60.716

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