Literature DB >> 9932458

Regulation of RNA polymerase I transcription in yeast and vertebrates.

R H Reeder1.   

Abstract

This article focuses on what is currently known about the regulation of transcription by RNA polymerase I (pol I) in eukaryotic organisms at opposite ends of the evolutionary spectrum--a yeast, Saccharomyces cerevisiae, and vertebrates, including mice, frogs, and man. Contemporary studies that have defined the DNA sequence elements are described, as well as the majority of the basal transcription factors essential for pol I transcription. Situations in which pol I transcription is known to be regulated are reviewed and possible regulatory mechanisms are critically discussed. Some aspects of basal pol I transcription machinery appear to have been conserved from fungi to vertebrates, but other aspects have evolved, perhaps to meet the needs of a metazoan organism. Different parts of the pol I transcription machinery are regulatory targets depending on different physiological stimuli. This suggests that multiple signaling pathways may also be involved. The involvement of ribosomal genes and their transcripts in events such as mitosis, cancer, and aging is discussed.

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Year:  1999        PMID: 9932458     DOI: 10.1016/s0079-6603(08)60511-5

Source DB:  PubMed          Journal:  Prog Nucleic Acid Res Mol Biol        ISSN: 0079-6603


  48 in total

1.  Ribosomal DNA replication fork barrier and HOT1 recombination hot spot: shared sequences but independent activities.

Authors:  T R Ward; M L Hoang; R Prusty; C K Lau; R L Keil; W L Fangman; B J Brewer
Journal:  Mol Cell Biol       Date:  2000-07       Impact factor: 4.272

2.  Overlapping functions of the pRb family in the regulation of rRNA synthesis.

Authors:  S Ciarmatori; P H Scott; J E Sutcliffe; A McLees; H M Alzuherri; J H Dannenberg; H te Riele; I Grummt; R Voit; R J White
Journal:  Mol Cell Biol       Date:  2001-09       Impact factor: 4.272

3.  RNA polymerase I holoenzyme-promoter complexes include an associated CK2-like protein kinase.

Authors:  J Saez-Vasquez; M Meissner; C S Pikaard
Journal:  Plant Mol Biol       Date:  2001-10       Impact factor: 4.076

4.  Analysis of intergenic spacer transcripts suggests 'read-around' transcription of the extrachromosomal circular rDNA in Euglena gracilis.

Authors:  S J Greenwood; M N Schnare; J R Cook; M W Gray
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

5.  Putative involvement of the histone acetyltransferase Tip60 in ribosomal gene transcription.

Authors:  Kalipso Halkidou; Ian R Logan; Susan Cook; David E Neal; Craig N Robson
Journal:  Nucleic Acids Res       Date:  2004-03-11       Impact factor: 16.971

6.  CTD kinase I is involved in RNA polymerase I transcription.

Authors:  Céline Bouchoux; Guillaume Hautbergue; Sabrina Grenetier; Christophe Carles; Michel Riva; Valérie Goguel
Journal:  Nucleic Acids Res       Date:  2004-11-01       Impact factor: 16.971

7.  Deletion of Rnt1p alters the proportion of open versus closed rRNA gene repeats in yeast.

Authors:  Mathieu Catala; Maxime Tremblay; Eric Samson; Antonio Conconi; Sherif Abou Elela
Journal:  Mol Cell Biol       Date:  2007-11-08       Impact factor: 4.272

8.  Tor pathway regulates Rrn3p-dependent recruitment of yeast RNA polymerase I to the promoter but does not participate in alteration of the number of active genes.

Authors:  Jonathan A Claypool; Sarah L French; Katsuki Johzuka; Kristilyn Eliason; Loan Vu; Jonathan A Dodd; Ann L Beyer; Masayasu Nomura
Journal:  Mol Biol Cell       Date:  2003-10-31       Impact factor: 4.138

9.  The role of acetylation in rDNA transcription.

Authors:  I Hirschler-Laszkiewicz; A Cavanaugh; Q Hu; J Catania; M L Avantaggiati; L I Rothblum
Journal:  Nucleic Acids Res       Date:  2001-10-15       Impact factor: 16.971

10.  Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules.

Authors:  Katharina Merz; Maria Hondele; Hannah Goetze; Katharina Gmelch; Ulrike Stoeckl; Joachim Griesenbeck
Journal:  Genes Dev       Date:  2008-05-01       Impact factor: 11.361

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