Literature DB >> 16621678

Directed evolution of enzymes and biosynthetic pathways.

Tyler W Johannes1, Huimin Zhao.   

Abstract

Directed evolution is an important tool for overcoming the limitations of natural enzymes as biocatalysts. Recent advances have focused on applying directed evolution to a variety of enzymes, such as epoxide hydrolase, glyphosate N-acetyltransferase, xylanase and phosphotriesterase, in order to improve their activity, selectivity, stability and solubility. The focus has also shifted to manipulating biosynthetic pathways for the production of many naturally synthesized compounds, as well as the production of novel 'unnatural' compounds. A combined directed evolution and computational design approach is becoming increasingly important in exploring enzyme sequence-space and creating improved or novel enzymes. Fueled by recent breakthroughs in genomics and metagenomics, these developments should help expand the use of biocatalysts in industry.

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Year:  2006        PMID: 16621678     DOI: 10.1016/j.mib.2006.03.003

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  35 in total

Review 1.  Protein aggregation in silico.

Authors:  Troy Cellmer; Dusan Bratko; John M Prausnitz; Harvey W Blanch
Journal:  Trends Biotechnol       Date:  2007-04-12       Impact factor: 19.536

Review 2.  Contributions of microorganisms to industrial biology.

Authors:  Arnold L Demain; Jose L Adrio
Journal:  Mol Biotechnol       Date:  2008-01       Impact factor: 2.695

3.  High-throughput selection for cellulase catalysts using chemical complementation.

Authors:  Pamela Peralta-Yahya; Brian T Carter; Hening Lin; Haiyan Tao; Virginia W Cornish
Journal:  J Am Chem Soc       Date:  2008-12-24       Impact factor: 15.419

Review 4.  Directed evolution drives the next generation of biocatalysts.

Authors:  Nicholas J Turner
Journal:  Nat Chem Biol       Date:  2009-08       Impact factor: 15.040

Review 5.  In the light of directed evolution: pathways of adaptive protein evolution.

Authors:  Jesse D Bloom; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-15       Impact factor: 11.205

Review 6.  Systems-biology approaches for predicting genomic evolution.

Authors:  Balázs Papp; Richard A Notebaart; Csaba Pál
Journal:  Nat Rev Genet       Date:  2011-08-02       Impact factor: 53.242

7.  Lysine acetylation can generate highly charged enzymes with increased resistance toward irreversible inactivation.

Authors:  Bryan F Shaw; Gregory F Schneider; Basar Bilgiçer; George K Kaufman; John M Neveu; William S Lane; Julian P Whitelegge; George M Whitesides
Journal:  Protein Sci       Date:  2008-05-01       Impact factor: 6.725

Review 8.  Miniaturization in biocatalysis.

Authors:  Pedro Fernandes
Journal:  Int J Mol Sci       Date:  2010-03-02       Impact factor: 5.923

Review 9.  Directing the evolution of Rubisco and Rubisco activase: first impressions of a new tool for photosynthesis research.

Authors:  Oliver Mueller-Cajar; Spencer M Whitney
Journal:  Photosynth Res       Date:  2008-07-15       Impact factor: 3.573

10.  Properties of the thioredoxin fold superfamily are modulated by a single amino acid residue.

Authors:  Guoping Ren; Daniel Stephan; Zhaohui Xu; Ying Zheng; Danming Tang; Rosemary S Harrison; Mareike Kurz; Russell Jarrott; Stephen R Shouldice; Annie Hiniker; Jennifer L Martin; Begoña Heras; James C A Bardwell
Journal:  J Biol Chem       Date:  2009-01-30       Impact factor: 5.157

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