Literature DB >> 16615119

Diagnosis of single-subject and group fMRI data with SPMd.

Hui Zhang1, Wen-Lin Luo, Thomas E Nichols.   

Abstract

Except for purely nonparametric methods, statistical methods depend on assumptions about the distribution of the data studied. While these assumptions are easily checked for a single univariate dataset with diagnostic plots, in the massively univariate model used with functional MRI (fMRI) it is impractical to check with a massive number of plots. In previous work we have demonstrated how to diagnose model assumptions and lack-of-fit for single-subject fMRI models using a working assumption of independent errors; our work depended on images and time series of summary statistics that, when simultaneously viewed dynamically, identify problem scans and voxels. In this article we extend our previous work to account for temporal autocorrelation in single-subject models and show how analogous methods can be used on group models where multiple subjects are studied. We apply these methods to the single-subject Functional Image Analysis Contest (FIAC) data and find several anomalies, but none that appear to invalidate the results for that subject. With the group FIAC data we find one subject (and possibly two more) that demonstrate a different pattern of activity. None of our conclusions would be arrived at by simply looking at images of t statistics, demonstrating the importance of model assessment through exploration of the data and diagnosis of model assumptions.

Mesh:

Year:  2006        PMID: 16615119      PMCID: PMC6871332          DOI: 10.1002/hbm.20253

Source DB:  PubMed          Journal:  Hum Brain Mapp        ISSN: 1065-9471            Impact factor:   5.038


  4 in total

1.  Classical and Bayesian inference in neuroimaging: applications.

Authors:  K J Friston; D E Glaser; R N A Henson; S Kiebel; C Phillips; J Ashburner
Journal:  Neuroimage       Date:  2002-06       Impact factor: 6.556

2.  Diagnosis and exploration of massively univariate neuroimaging models.

Authors:  Wen-Lin Luo; Thomas E Nichols
Journal:  Neuroimage       Date:  2003-07       Impact factor: 6.556

3.  Increased sensitivity in neuroimaging analyses using robust regression.

Authors:  Tor D Wager; Matthew C Keller; Steven C Lacey; John Jonides
Journal:  Neuroimage       Date:  2005-05-15       Impact factor: 6.556

4.  Functional segregation of cortical language areas by sentence repetition.

Authors:  Ghislaine Dehaene-Lambertz; Stanislas Dehaene; Jean-Luc Anton; Aurelie Campagne; Philippe Ciuciu; Guillaume P Dehaene; Isabelle Denghien; Antoinette Jobert; Denis Lebihan; Mariano Sigman; Christophe Pallier; Jean-Baptiste Poline
Journal:  Hum Brain Mapp       Date:  2006-05       Impact factor: 5.038

  4 in total
  10 in total

1.  Group analysis and the subject factor in functional magnetic resonance imaging: analysis of fifty right-handed healthy subjects in a semantic language task.

Authors:  Mohamed L Seghier; François Lazeyras; Alan J Pegna; Jean-Marie Annoni; Asaid Khateb
Journal:  Hum Brain Mapp       Date:  2008-04       Impact factor: 5.038

2.  The power of spectral density analysis for mapping endogenous BOLD signal fluctuations.

Authors:  Eugene P Duff; Leigh A Johnston; Jinhu Xiong; Peter T Fox; Iven Mareels; Gary F Egan
Journal:  Hum Brain Mapp       Date:  2008-07       Impact factor: 5.038

3.  Bootstrapping fMRI Data: Dealing with Misspecification.

Authors:  Sanne P Roels; Beatrijs Moerkerke; Tom Loeys
Journal:  Neuroinformatics       Date:  2015-07

4.  REX: response exploration for neuroimaging datasets.

Authors:  Eugene P Duff; Ross Cunnington; Gary F Egan
Journal:  Neuroinformatics       Date:  2007-11-06

5.  Post traumatic brain perfusion SPECT analysis using reconstructed ROI maps of radioactive microsphere derived cerebral blood flow and statistical parametric mapping.

Authors:  Anthony J McGoron; Michael Capille; Michael F Georgiou; Pablo Sanchez; Juan Solano; Manuel Gonzalez-Brito; John W Kuluz
Journal:  BMC Med Imaging       Date:  2008-02-29       Impact factor: 1.930

6.  Multivariate and repeated measures (MRM): A new toolbox for dependent and multimodal group-level neuroimaging data.

Authors:  Martyn McFarquhar; Shane McKie; Richard Emsley; John Suckling; Rebecca Elliott; Stephen Williams
Journal:  Neuroimage       Date:  2016-02-24       Impact factor: 6.556

7.  Detecting subject-specific activations using fuzzy clustering.

Authors:  Mohamed L Seghier; Karl J Friston; Cathy J Price
Journal:  Neuroimage       Date:  2007-03-28       Impact factor: 6.556

8.  Development of the complex general linear model in the Fourier domain: application to fMRI multiple input-output evoked responses for single subjects.

Authors:  Daniel E Rio; Robert R Rawlings; Lawrence A Woltz; Jodi Gilman; Daniel W Hommer
Journal:  Comput Math Methods Med       Date:  2013-06-12       Impact factor: 2.238

9.  Model specification and the reliability of fMRI results: implications for longitudinal neuroimaging studies in psychiatry.

Authors:  Jay C Fournier; Henry W Chase; Jorge Almeida; Mary L Phillips
Journal:  PLoS One       Date:  2014-08-28       Impact factor: 3.240

10.  Visualising inter-subject variability in fMRI using threshold-weighted overlap maps.

Authors:  Mohamed L Seghier; Cathy J Price
Journal:  Sci Rep       Date:  2016-02-05       Impact factor: 4.379

  10 in total

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