Literature DB >> 16604060

Preventing gene silencing with human replicators.

Haiqing Fu1, Lixin Wang, Chii-Mei Lin, Sumegha Singhania, Eric E Bouhassira, Mirit I Aladjem.   

Abstract

Transcriptional silencing, one of the major impediments to gene therapy in humans, is often accompanied by replication during late S-phase. We report that transcriptional silencing and late replication were prevented by DNA sequences that can initiate DNA replication (replicators). When replicators were included in silencing-prone transgenes, they did not undergo transcriptional silencing, replicated early and maintained histone acetylation patterns characteristic of euchromatin. A mutant replicator, which could not initiate replication, could not prevent gene silencing and replicated late when included in identical transgenes and inserted at identical locations. These observations suggest that replicators introduce epigenetic chromatin changes that facilitate initiation of DNA replication and affect gene silencing. Inclusion of functional replicators in gene therapy vectors may provide a tool for stabilizing gene expression patterns.

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Year:  2006        PMID: 16604060     DOI: 10.1038/nbt1202

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  26 in total

1.  Rif1 choreographs DNA replication timing.

Authors:  Mirit I Aladjem
Journal:  EMBO J       Date:  2012-08-14       Impact factor: 11.598

2.  Prevention of transcriptional silencing by a replicator-binding complex consisting of SWI/SNF, MeCP1, and hnRNP C1/C2.

Authors:  Liang Huang; Haiqing Fu; Chii Mei Lin; Amy L Conner; Ya Zhang; Mirit I Aladjem
Journal:  Mol Cell Biol       Date:  2011-06-20       Impact factor: 4.272

3.  tRNA genes protect a reporter gene from epigenetic silencing in mouse cells.

Authors:  Thomas Ebersole; Jung-Hyun Kim; Alexander Samoshkin; Natalay Kouprina; Adam Pavlicek; Robert J White; Vladimir Larionov
Journal:  Cell Cycle       Date:  2011-08-15       Impact factor: 4.534

Review 4.  The chromatin backdrop of DNA replication: lessons from genetics and genome-scale analyses.

Authors:  Amy L Conner; Mirit I Aladjem
Journal:  Biochim Biophys Acta       Date:  2012-02-08

Review 5.  Chromatin structure and replication origins: determinants of chromosome replication and nuclear organization.

Authors:  Owen K Smith; Mirit I Aladjem
Journal:  J Mol Biol       Date:  2014-06-04       Impact factor: 5.469

6.  Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing.

Authors:  Jung-Hyun Kim; Thomas Ebersole; Natalay Kouprina; Vladimir N Noskov; Jun-Ichirou Ohzeki; Hiroshi Masumoto; Brankica Mravinac; Beth A Sullivan; Adam Pavlicek; Sinisa Dovat; Svetlana D Pack; Yoo-Wook Kwon; Patrick T Flanagan; Dmitri Loukinov; Victor Lobanenkov; Vladimir Larionov
Journal:  Genome Res       Date:  2009-01-13       Impact factor: 9.043

7.  Extended transgene expression from a nonintegrating adenoviral vector containing retroviral elements.

Authors:  Changyu Zheng; Joseph M Vitolo; Weitian Zhang; Fumi Mineshiba; John A Chiorini; Bruce J Baum
Journal:  Mol Ther       Date:  2008-03-25       Impact factor: 11.454

8.  Predictable dynamic program of timing of DNA replication in human cells.

Authors:  Romain Desprat; Danielle Thierry-Mieg; Nathalie Lailler; Julien Lajugie; Carl Schildkraut; Jean Thierry-Mieg; Eric E Bouhassira
Journal:  Genome Res       Date:  2009-09-18       Impact factor: 9.043

9.  Decreased replication origin activity in temporal transition regions.

Authors:  Zeqiang Guan; Christina M Hughes; Settapong Kosiyatrakul; Paolo Norio; Ranjan Sen; Steven Fiering; C David Allis; Eric E Bouhassira; Carl L Schildkraut
Journal:  J Cell Biol       Date:  2009-11-30       Impact factor: 10.539

10.  Gene specificity of suppression of transgene-mediated insertional transcriptional activation by the chicken HS4 insulator.

Authors:  Romain Desprat; Eric E Bouhassira
Journal:  PLoS One       Date:  2009-06-18       Impact factor: 3.240

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