Literature DB >> 16601925

The complete nucleotide sequence of a capsicum chlorosis virus isolate from Lycopersicum esculentum in Thailand.

D Knierim1, R Blawid, E Maiss.   

Abstract

The complete nucleotide sequence of a tospovirus isolated from Lycopersicum esculentum in Thailand was determined. The L RNA comprises of 8912 nt and codes for the RNA-dependent RNA-polymerase (RdRp) (2877 aa). Two ORFs are located on the M RNA (4823 nt) encoding the non-structural (NSm) protein (308 aa) and the viral glycoprotein precursors (Gn/Gc) (1121 aa) separated by an intergenic region of 433 nt. ORFs coding for the non-structural (NSs) and nucleocapsid (N) protein, 439 aa and 275 aa, respectively, were identified on the S RNA (3477 nt) separated by an intergenic region of 1202 nt. The N protein of the Thailand isolate was most closely related to that of capsicum chlorosis virus (CaCV), sharing an amino acid sequence identity of 92.7%. Additionally, multiple sequence analyses revealed significant similarities to tospoviruses of the species Watermelon silver mottle virus and to several putative tospovirus entries in GenBank. Based on these alignments it is proposed to refer to all these different viruses as isolates of CaCV.

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Year:  2006        PMID： 16601925     DOI： 10.1007/s00705-006-0749-4

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  10 in total

1.  Taxonomy of the order Bunyavirales: update 2019.

Authors:  Abulikemu Abudurexiti; Scott Adkins; Daniela Alioto; Sergey V Alkhovsky; Tatjana Avšič-Županc; Matthew J Ballinger; Dennis A Bente; Martin Beer; Éric Bergeron; Carol D Blair; Thomas Briese; Michael J Buchmeier; Felicity J Burt; Charles H Calisher; Chénchén Cháng; Rémi N Charrel; Il Ryong Choi; J Christopher S Clegg; Juan Carlos de la Torre; Xavier de Lamballerie; Fēi Dèng; Francesco Di Serio; Michele Digiaro; Michael A Drebot; Xiǎoméi Duàn; Hideki Ebihara; Toufic Elbeaino; Koray Ergünay; Charles F Fulhorst; Aura R Garrison; George Fú Gāo; Jean-Paul J Gonzalez; Martin H Groschup; Stephan Günther; Anne-Lise Haenni; Roy A Hall; Jussi Hepojoki; Roger Hewson; Zhìhóng Hú; Holly R Hughes; Miranda Gilda Jonson; Sandra Junglen; Boris Klempa; Jonas Klingström; Chūn Kòu; Lies Laenen; Amy J Lambert; Stanley A Langevin; Dan Liu; Igor S Lukashevich; Tāo Luò; Chuánwèi Lǚ; Piet Maes; William Marciel de Souza; Marco Marklewitz; Giovanni P Martelli; Keita Matsuno; Nicole Mielke-Ehret; Maria Minutolo; Ali Mirazimi; Abulimiti Moming; Hans-Peter Mühlbach; Rayapati Naidu; Beatriz Navarro; Márcio Roberto Teixeira Nunes; Gustavo Palacios; Anna Papa; Alex Pauvolid-Corrêa; Janusz T Pawęska; Jié Qiáo; Sheli R Radoshitzky; Renato O Resende; Víctor Romanowski; Amadou Alpha Sall; Maria S Salvato; Takahide Sasaya; Shū Shěn; Xiǎohóng Shí; Yukio Shirako; Peter Simmonds; Manuela Sironi; Jin-Won Song; Jessica R Spengler; Mark D Stenglein; Zhèngyuán Sū; Sùróng Sūn; Shuāng Táng; Massimo Turina; Bó Wáng; Chéng Wáng; Huálín Wáng; Jūn Wáng; Tàiyún Wèi; Anna E Whitfield; F Murilo Zerbini; Jìngyuàn Zhāng; Lěi Zhāng; Yànfāng Zhāng; Yong-Zhen Zhang; Yújiāng Zhāng; Xueping Zhou; Lìyǐng Zhū; Jens H Kuhn
Journal:  Arch Virol       Date:  2019-05-07       Impact factor: 2.574

2.  Pest categorisation of Capsicum chlorosis virus.

Authors:  Claude Bragard; Paula Baptista; Elisavet Chatzivassiliou; Paolo Gonthier; Josep Anton Jaques Miret; Annemarie Fejer Justesen; Alan MacLeod; Christer Sven Magnusson; Panagiotis Milonas; Juan A Navas-Cortes; Stephen Parnell; Roel Potting; Philippe Lucien Reignault; Emilio Stefani; Hans-Hermann Thulke; Wopke Van der Werf; Antonio Vicent Civera; Jonathan Yuen; Lucia Zappalà; Katharina Dehnen-Schmutz; Quirico Migheli; Irene Vloutoglou; Ewelina Czwienczek; Franz Streissl; Anna Vittoria Carluccio; Michela Chiumenti; Francesco Di Serio; Luisa Rubino; Philippe Lucien Reignault
Journal:  EFSA J       Date:  2022-06-14

3.  The glycoprotein gene of Chrysanthemum stem necrosis virus and Zucchini lethal chlorosis virus and molecular relationship with other tospoviruses.

Authors:  Tatsuya Nagata; Keisiane Rodrigues Carvalho; Rogeria De Alcântara Sodré; Luisa Silva Dutra; Priscila Amorim Oliveira; Eliane Ferreira Noronha; Fernanda Antinolfi Lovato; Renato De Oliveira Resende; Antônio Carlos De Avila; Alice Kazuko Inoue-Nagata
Journal:  Virus Genes       Date:  2007-06-15       Impact factor: 2.332

4.  Molecular characterization of the full-length L and M RNAs of Tomato yellow ring virus, a member of the genus Tospovirus.

Authors:  Tsung-Chi Chen; Ju-Ting Li; Ya-Shu Fan; Yi-Chun Yeh; Shyi-Dong Yeh; Richard Kormelink
Journal:  Virus Genes       Date:  2013-01-19       Impact factor: 2.332

5.  Circovirus in tissues of dogs with vasculitis and hemorrhage.

Authors:  Linlin Li; Sabrina McGraw; Kevin Zhu; Christian M Leutenegger; Stanley L Marks; Steven Kubiski; Patricia Gaffney; Florante N Dela Cruz; Chunlin Wang; Eric Delwart; Patricia A Pesavento
Journal:  Emerg Infect Dis       Date:  2013-04       Impact factor: 6.883

6.  Characterization of bean necrotic mosaic virus: a member of a novel evolutionary lineage within the Genus Tospovirus.

Authors:  Athos Silva de Oliveira; Fernando Lucas Melo; Alice Kazuko Inoue-Nagata; Tatsuya Nagata; Elliot Watanabe Kitajima; Renato Oliveira Resende
Journal:  PLoS One       Date:  2012-06-08       Impact factor: 3.240

7.  Transcriptome Analysis of Capsicum Chlorosis Virus-Induced Hypersensitive Resistance Response in Bell Capsicum.

Authors:  Shirani M K Widana Gamage; Desmond J McGrath; Denis M Persley; Ralf G Dietzgen
Journal:  PLoS One       Date:  2016-07-11       Impact factor: 3.240

8.  Intracellular Localization, Interactions and Functions of Capsicum Chlorosis Virus Proteins.

Authors:  Shirani M K Widana Gamage; Ralf G Dietzgen
Journal:  Front Microbiol       Date:  2017-04-11       Impact factor: 5.640

9.  Temporal expression of defence and susceptibility genes and tospovirus accumulation in capsicum chlorosis virus-infected capsicum.

Authors:  Fernanda Yuri Borges Naito; Shirani Manel Kumari Widana Gamage; Neena Mitter; Ralf Georg Dietzgen
Journal:  Arch Virol       Date:  2022-03-04       Impact factor: 2.574

10.  Broad-spectrum transgenic resistance against distinct tospovirus species at the genus level.

Authors:  Jui-Chu Peng; Tsung-Chi Chen; Joseph A J Raja; Ching-Fu Yang; Wan-Chu Chien; Chen-Hsuan Lin; Fang-Lin Liu; Hui-Wen Wu; Shyi-Dong Yeh
Journal:  PLoS One       Date:  2014-05-08       Impact factor: 3.240
  10 in total

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