Literature DB >> 16598038

The Drosophila P68 RNA helicase regulates transcriptional deactivation by promoting RNA release from chromatin.

Michael Buszczak1, Allan C Spradling.   

Abstract

Terminating a gene's activity requires that pre-existing transcripts be matured or destroyed and that the local chromatin structure be returned to an inactive configuration. Here we show that the Drosophila homolog of the mammalian P68 RNA helicase plays a novel role in RNA export and gene deactivation. p68 mutations phenotypically resemble mutations in small bristles (sbr), the Drosophila homolog of the human mRNA export factor NXF1. Full-length hsp70 mRNA accumulates in the nucleus near its sites of transcription following heat shock of p68 homozygotes, and hsp70 gene shutdown is delayed. Unstressed mutant larvae show similar defects in transcript accumulation and gene repression at diverse loci, and we find that p68 mutations are allelic to Lighten-up, a known suppressor of position effect variegation. Our observations reveal a strong connection between transcript clearance and gene repression. P68 may be needed to rapidly remove transcripts from a gene before its activity can be shut down and its chromatin reset to an inactive state.

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Year:  2006        PMID: 16598038      PMCID: PMC1472305          DOI: 10.1101/gad.1396306

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  62 in total

1.  Multiple components of the HSP90 chaperone complex function in regulation of heat shock factor 1 In vivo.

Authors:  S Bharadwaj; A Ali; N Ovsenek
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  TREX is a conserved complex coupling transcription with messenger RNA export.

Authors:  Katja Strässer; Seiji Masuda; Paul Mason; Jens Pfannstiel; Marisa Oppizzi; Susana Rodriguez-Navarro; Ana G Rondón; Andres Aguilera; Kevin Struhl; Robin Reed; Ed Hurt
Journal:  Nature       Date:  2002-04-28       Impact factor: 49.962

3.  The ATPase, RNA unwinding, and RNA binding activities of recombinant p68 RNA helicase.

Authors:  Youliang Huang; Zhi-Ren Liu
Journal:  J Biol Chem       Date:  2002-01-31       Impact factor: 5.157

4.  U1 snRNA associates with TFIIH and regulates transcriptional initiation.

Authors:  Kon Yew Kwek; Shona Murphy; Andre Furger; Benjamin Thomas; William O'Gorman; Hiroshi Kimura; Nick J Proudfoot; Alexandre Akoulitchev
Journal:  Nat Struct Biol       Date:  2002-11

5.  Nuclear coupling: RNA processing reaches back to transcription.

Authors:  James L Manley
Journal:  Nat Struct Biol       Date:  2002-11

6.  A Drosophila fragile X protein interacts with components of RNAi and ribosomal proteins.

Authors:  Akira Ishizuka; Mikiko C Siomi; Haruhiko Siomi
Journal:  Genes Dev       Date:  2002-10-01       Impact factor: 11.361

7.  The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability.

Authors:  S Jimeno; A G Rondón; R Luna; A Aguilera
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

8.  The RNA processing exosome is linked to elongating RNA polymerase II in Drosophila.

Authors:  Erik D Andrulis; Janis Werner; Arpi Nazarian; Hediye Erdjument-Bromage; Paul Tempst; John T Lis
Journal:  Nature       Date:  2002 Dec 19-26       Impact factor: 49.962

9.  REF1/Aly and the additional exon junction complex proteins are dispensable for nuclear mRNA export.

Authors:  David Gatfield; Elisa Izaurralde
Journal:  J Cell Biol       Date:  2002-11-18       Impact factor: 10.539

10.  Chromatin loosening by poly(ADP)-ribose polymerase (PARP) at Drosophila puff loci.

Authors:  Alexei Tulin; Allan Spradling
Journal:  Science       Date:  2003-01-24       Impact factor: 47.728

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  46 in total

Review 1.  The DDX5/Dbp2 subfamily of DEAD-box RNA helicases.

Authors:  Zheng Xing; Wai Kit Ma; Elizabeth J Tran
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-12-02       Impact factor: 9.957

2.  poly is required for nurse-cell chromosome dispersal and oocyte polarity in Drosophila.

Authors:  Stephen Klusza; Wu-Min Deng
Journal:  Fly (Austin)       Date:  2010-04-02       Impact factor: 2.160

3.  Long-term live imaging provides new insight into stem cell regulation and germline-soma coordination in the Drosophila ovary.

Authors:  Lucy X Morris; Allan C Spradling
Journal:  Development       Date:  2011-06       Impact factor: 6.868

4.  The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub.

Authors:  Pak N Kwong; Michael Chambers; Ajay A Vashisht; Wiam Turki-Judeh; Tak Yu Yau; James A Wohlschlegel; Albert J Courey
Journal:  J Biol Chem       Date:  2015-10-19       Impact factor: 5.157

5.  Stem-loop recognition by DDX17 facilitates miRNA processing and antiviral defense.

Authors:  Ryan H Moy; Brian S Cole; Ari Yasunaga; Beth Gold; Ganesh Shankarling; Andrew Varble; Jerome M Molleston; Benjamin R tenOever; Kristen W Lynch; Sara Cherry
Journal:  Cell       Date:  2014-08-14       Impact factor: 41.582

6.  Repression of Pumilio Protein Expression by Rbfox1 Promotes Germ Cell Differentiation.

Authors:  Arnaldo Carreira-Rosario; Varsha Bhargava; Jens Hillebrand; Rahul K Kollipara; Mani Ramaswami; Michael Buszczak
Journal:  Dev Cell       Date:  2016-03-07       Impact factor: 12.270

7.  14-3-3 mediates histone cross-talk during transcription elongation in Drosophila.

Authors:  Caline S Karam; Wendy A Kellner; Naomi Takenaka; Alexa W Clemmons; Victor G Corces
Journal:  PLoS Genet       Date:  2010-06-03       Impact factor: 5.917

Review 8.  Small RNA-directed heterochromatin formation in the context of development: what flies might learn from fission yeast.

Authors:  Kathryn L Huisinga; Sarah C R Elgin
Journal:  Biochim Biophys Acta       Date:  2008-08-16

9.  P68 RNA helicase is a nucleocytoplasmic shuttling protein.

Authors:  Haizhen Wang; Xueliang Gao; Yun Huang; Jenny Yang; Zhi-Ren Liu
Journal:  Cell Res       Date:  2009-09-29       Impact factor: 25.617

10.  A conserved CCCH-type zinc finger protein regulates mRNA nuclear adenylation and export.

Authors:  Jessica A Hurt; Robert A Obar; Bo Zhai; Natalie G Farny; Steven P Gygi; Pamela A Silver
Journal:  J Cell Biol       Date:  2009-04-13       Impact factor: 10.539

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