Literature DB >> 16598010

Fluorescence in situ hybridization and spectral imaging of coral-associated bacterial communities.

T D Ainsworth1, M Fine, L L Blackall, O Hoegh-Guldberg.   

Abstract

Microbial communities play important roles in the functioning of coral reef communities. However, extensive autofluorescence of coral tissues and endosymbionts limits the application of standard fluorescence in situ hybridization (FISH) techniques for the identification of the coral-associated bacterial communities. This study overcomes these limitations by combining FISH and spectral imaging.

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Year:  2006        PMID： 16598010      PMCID： PMC1449077          DOI： 10.1128/AEM.72.4.3016-3020.2006

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  26 in total

1.  Widefield deconvolution epifluorescence microscopy combined with fluorescence in situ hybridization reveals the spatial arrangement of bacteria in sponge tissue.

Authors:  W Manz; G Arp; G Schumann-Kindel; U Szewzyk; J Reitner
Journal:  J Microbiol Methods       Date:  2000-04       Impact factor: 2.363

2.  Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter.

Authors:  M T Cottrell; D L Kirchman
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

Review 3.  Multi-spectral imaging and linear unmixing add a whole new dimension to laser scanning fluorescence microscopy.

Authors:  M E Dickinson; G Bearman; S Tille; R Lansford; S E Fraser
Journal:  Biotechniques       Date:  2001-12       Impact factor: 1.993

Review 4.  The identification of microorganisms by fluorescence in situ hybridisation.

Authors:  R Amann; B M Fuchs; S Behrens
Journal:  Curr Opin Biotechnol       Date:  2001-06       Impact factor: 9.740

5.  Histopathological methods for the investigation of microbial communities associated with disease lesions in reef corals.

Authors:  J C Bythell; M R Barer; R P Cooney; J R Guest; A G O'Donnell; O Pantos; M D A Le Tissier
Journal:  Lett Appl Microbiol       Date:  2002       Impact factor: 2.858

Review 6.  Climate warming and disease risks for terrestrial and marine biota.

Authors:  C Drew Harvell; Charles E Mitchell; Jessica R Ward; Sonia Altizer; Andrew P Dobson; Richard S Ostfeld; Michael D Samuel
Journal:  Science       Date:  2002-06-21       Impact factor: 47.728

Review 7.  Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes.

Authors:  Michael Wagner; Matthias Horn; Holger Daims
Journal:  Curr Opin Microbiol       Date:  2003-06       Impact factor: 7.934

8.  Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports.

Authors:  Thierry Bouvier; Paul A Del Giorgio
Journal:  FEMS Microbiol Ecol       Date:  2003-05-01       Impact factor: 4.194

Review 9.  Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

Authors:  P Hugenholtz; B M Goebel; N R Pace
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

10.  Microbial communities associated with skeletal tumors on Porites compressa.

Authors:  Mya Breitbart; Ranjeet Bhagooli; Sean Griffin; Ian Johnston; Forest Rohwer
Journal:  FEMS Microbiol Lett       Date:  2005-02-15       Impact factor: 2.742
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  21 in total

1.  Modular spectral imaging system for discrimination of pigments in cells and microbial communities.

Authors:  Lubos Polerecky; Andrew Bissett; Mohammad Al-Najjar; Paul Faerber; Harald Osmers; Peter A Suci; Paul Stoodley; Dirk de Beer
Journal:  Appl Environ Microbiol       Date:  2008-12-12       Impact factor: 4.792

2.  Composition of Bacterial Communities Associated with Aurelia aurita Changes with Compartment, Life Stage, and Population.

Authors:  Nancy Weiland-Bräuer; Sven C Neulinger; Nicole Pinnow; Sven Künzel; John F Baines; Ruth A Schmitz
Journal:  Appl Environ Microbiol       Date:  2015-06-26       Impact factor: 4.792

3.  Floc Formation Reduces the pH Stress Experienced by Microorganisms Living in Alkaline Environments.

Authors:  C J Charles; S P Rout; K A Patel; S Akbar; A P Laws; B R Jackson; S A Boxall; P N Humphreys
Journal:  Appl Environ Microbiol       Date:  2017-03-02       Impact factor: 4.792

4.  Detection and quantification of the coral pathogen Vibrio coralliilyticus by real-time PCR with TaqMan fluorescent probes.

Authors:  F Joseph Pollock; Pamela J Morris; Bette L Willis; David G Bourne
Journal:  Appl Environ Microbiol       Date:  2010-06-04       Impact factor: 4.792

5.  White Syndrome-Affected Corals Have a Distinct Microbiome at Disease Lesion Fronts.

Authors:  F Joseph Pollock; Naohisa Wada; Gergely Torda; Bette L Willis; David G Bourne
Journal:  Appl Environ Microbiol       Date:  2016-12-30       Impact factor: 4.792

6.  Coral disease diagnostics: what's between a plague and a band?

Authors:  T D Ainsworth; E Kramasky-Winter; Y Loya; O Hoegh-Guldberg; M Fine
Journal:  Appl Environ Microbiol       Date:  2006-12-08       Impact factor: 4.792

7.  Specificity of associations between bacteria and the coral Pocillopora meandrina during early development.

Authors:  Amy Apprill; Heather Q Marlow; Mark Q Martindale; Michael S Rappé
Journal:  Appl Environ Microbiol       Date:  2012-08-17       Impact factor: 4.792

8.  Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site- and species-specificity of common bacterial associates.

Authors:  E Charlotte E Kvennefors; Eugenia Sampayo; Tyrone Ridgway; Andrew C Barnes; Ove Hoegh-Guldberg
Journal:  PLoS One       Date:  2010-04-29       Impact factor: 3.240

9.  Epizoic communities of prokaryotes on healthy and diseased scleractinian corals in Lingayen Gulf, Philippines.

Authors:  Mark Arboleda; Wolfgang Reichardt
Journal:  Microb Ecol       Date:  2008-06-06       Impact factor: 4.552

Review 10.  The urgent need for robust coral disease diagnostics.

Authors:  F Joseph Pollock; Pamela J Morris; Bette L Willis; David G Bourne
Journal:  PLoS Pathog       Date:  2011-10-20       Impact factor: 6.823
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