Literature DB >> 16595626

Directed evolution to probe protein allostery and integrin I domains of 200,000-fold higher affinity.

Moonsoo Jin1, Gang Song, Christopher V Carman, Yong-Sung Kim, Nathan S Astrof, Motomu Shimaoka, Dane K Wittrup, Timothy A Springer.   

Abstract

Understanding allostery may serve to both elucidate mechanisms of protein regulation and provide a basis for engineering active mutants. Herein we describe directed evolution applied to the integrin alpha(L) inserted domain for studying allostery by using a yeast surface display system. Many hot spots for activation are identified, and some single mutants exhibit remarkable increases of 10,000-fold in affinity for a physiological ligand, intercellular adhesion molecule-1. The location of activating mutations traces out an allosteric interface in the interior of the inserted domain that connects the ligand binding site to the alpha7-helix, which communicates allostery to neighboring domains in intact integrins. The combination of two activating mutations (F265S/F292G) leads to an increase of 200,000-fold in affinity to intercellular adhesion molecule-1. The F265S/F292G mutant is potent in antagonizing lymphocyte function-associated antigen 1-dependent lymphocyte adhesion, aggregation, and transmigration.

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Year:  2006        PMID: 16595626      PMCID: PMC1458646          DOI: 10.1073/pnas.0601164103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  20 in total

1.  Structural basis of collagen recognition by integrin alpha2beta1.

Authors:  J Emsley; C G Knight; R W Farndale; M J Barnes; R C Liddington
Journal:  Cell       Date:  2000-03-31       Impact factor: 41.582

2.  Influence of proline residues on protein conformation.

Authors:  M W MacArthur; J M Thornton
Journal:  J Mol Biol       Date:  1991-03-20       Impact factor: 5.469

3.  Conversion between three conformational states of integrin I domains with a C-terminal pull spring studied with molecular dynamics.

Authors:  Moonsoo Jin; Ioan Andricioaei; Timothy A Springer
Journal:  Structure       Date:  2004-12       Impact factor: 5.006

4.  NMR and mutagenesis evidence for an I domain allosteric site that regulates lymphocyte function-associated antigen 1 ligand binding.

Authors:  J R Huth; E T Olejniczak; R Mendoza; H Liang; E A Harris; M L Lupher; A E Wilson; S W Fesik; D E Staunton
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

5.  Two conformations of the integrin A-domain (I-domain): a pathway for activation?

Authors:  J O Lee; L A Bankston; M A Arnaout; R C Liddington
Journal:  Structure       Date:  1995-12-15       Impact factor: 5.006

6.  Yeast surface display for directed evolution of protein expression, affinity, and stability.

Authors:  E T Boder; K D Wittrup
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

7.  Crystal structure of the I-domain from the CD11a/CD18 (LFA-1, alpha L beta 2) integrin.

Authors:  A Qu; D J Leahy
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-24       Impact factor: 11.205

8.  A human lymphocyte-associated antigen involved in cell-mediated lympholysis.

Authors:  J E Hildreth; F M Gotch; P D Hildreth; A J McMichael
Journal:  Eur J Immunol       Date:  1983-03       Impact factor: 5.532

9.  Two functional states of the CD11b A-domain: correlations with key features of two Mn2+-complexed crystal structures.

Authors:  R Li; P Rieu; D L Griffith; D Scott; M A Arnaout
Journal:  J Cell Biol       Date:  1998-12-14       Impact factor: 10.539

10.  The requirement for lymphocyte function-associated antigen 1 in homotypic leukocyte adhesion stimulated by phorbol ester.

Authors:  R Rothlein; T A Springer
Journal:  J Exp Med       Date:  1986-05-01       Impact factor: 14.307

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  36 in total

1.  Engineering of single Ig superfamily domain of intercellular adhesion molecule 1 (ICAM-1) for native fold and function.

Authors:  Róisín M Owens; Xiaoling Gu; Miran Shin; Timothy A Springer; Moonsoo M Jin
Journal:  J Biol Chem       Date:  2010-03-19       Impact factor: 5.157

2.  Allosteric drug discrimination is coupled to mechanochemical changes in the kinesin-5 motor core.

Authors:  Elizabeth D Kim; Rebecca Buckley; Sarah Learman; Jessica Richard; Courtney Parke; David K Worthylake; Edward J Wojcik; Richard A Walker; Sunyoung Kim
Journal:  J Biol Chem       Date:  2010-03-18       Impact factor: 5.157

Review 3.  Structural basis of integrin regulation and signaling.

Authors:  Bing-Hao Luo; Christopher V Carman; Timothy A Springer
Journal:  Annu Rev Immunol       Date:  2007       Impact factor: 28.527

4.  Isolation of αL I domain mutants mediating firm cell adhesion using a novel flow-based sorting method.

Authors:  Lauren R Pepper; Ranganath Parthasarathy; Gregory P Robbins; Nicholas N Dang; Daniel A Hammer; Eric T Boder
Journal:  Protein Eng Des Sel       Date:  2013-06-19       Impact factor: 1.650

5.  A PH domain within OCRL bridges clathrin-mediated membrane trafficking to phosphoinositide metabolism.

Authors:  Yuxin Mao; Daniel M Balkin; Roberto Zoncu; Kai S Erdmann; Livia Tomasini; Fenghua Hu; Moonsoo M Jin; Michael E Hodsdon; Pietro De Camilli
Journal:  EMBO J       Date:  2009-06-18       Impact factor: 11.598

6.  Distinct recognition of complement iC3b by integrins αXβ2 and αMβ2.

Authors:  Shutong Xu; Jianchuan Wang; Jia-Huai Wang; Timothy A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-14       Impact factor: 11.205

7.  I-domain-antigen conjugate (IDAC) for delivering antigenic peptides to APC: synthesis, characterization, and in vivo EAE suppression.

Authors:  Prakash Manikwar; Barlas Büyüktimkin; Paul Kiptoo; Ahmed H Badawi; Nadezhda A Galeva; Todd D Williams; Teruna J Siahaan
Journal:  Bioconjug Chem       Date:  2012-03-12       Impact factor: 4.774

8.  Structures of the Toxoplasma gliding motility adhesin.

Authors:  Gaojie Song; Timothy A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-17       Impact factor: 11.205

9.  Regulation of integrin affinity on cell surfaces.

Authors:  Thomas Schürpf; Timothy A Springer
Journal:  EMBO J       Date:  2011-09-23       Impact factor: 11.598

10.  Computation of conformational coupling in allosteric proteins.

Authors:  Brian A Kidd; David Baker; Wendy E Thomas
Journal:  PLoS Comput Biol       Date:  2009-08-28       Impact factor: 4.475

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