Literature DB >> 16595561

ProMAT: protein microarray analysis tool.

Amanda M White1, Don S Daly, Susan M Varnum, Kevin K Anderson, Nikki Bollinger, Richard C Zangar.   

Abstract

SUMMARY: ProMAT is a software tool for statistically analyzing data from enzyme-linked immunosorbent assay microarray experiments. The software estimates standard curves, sample protein concentrations and their uncertainties for multiple assays. ProMAT generates a set of comprehensive figures for assessing results and diagnosing process quality. The tool is available for Windows or Mac, and is distributed as open-source Java and R code. AVAILABILITY: ProMAT is available at http://www.pnl.gov/statistics/ProMAT. ProMAT requires Java version 1.5.0 and R version 1.9.1 (or more recent versions). ProMAT requires either Windows XP or Mac OS 10.4 or newer versions.

Mesh：

Year:  2006        PMID： 16595561     DOI： 10.1093/bioinformatics/btl093

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  16 in total

1.  Multiplexed cancer biomarker detection using quartz-based photonic crystal surfaces.

Authors:  Cheng-Sheng Huang; Vikram Chaudhery; Anusha Pokhriyal; Sherine George; James Polans; Meng Lu; Ruimin Tan; Richard C Zangar; Brian T Cunningham
Journal:  Anal Chem       Date:  2011-12-29       Impact factor: 6.986

2.  Macrophage responses to silica nanoparticles are highly conserved across particle sizes.

Authors:  Katrina M Waters; Lisa M Masiello; Richard C Zangar; Barbara J Tarasevich; Norman J Karin; Ryan D Quesenberry; Somnath Bandyopadhyay; Justin G Teeguarden; Joel G Pounds; Brian D Thrall
Journal:  Toxicol Sci       Date:  2008-12-10       Impact factor: 4.849

3.  ELISA-BASE: an integrated bioinformatics tool for analyzing and tracking ELISA microarray data.

Authors:  Amanda M White; James R Collett; Shannon L Seurynck-Servoss; Don S Daly; Richard C Zangar
Journal:  Bioinformatics       Date:  2009-04-03       Impact factor: 6.937

4.  An Automated Microfluidic Assay for Photonic Crystal Enhanced Detection and Analysis of an Antiviral Antibody Cancer Biomarker in Serum.

Authors:  Caitlin M Race; Lydia E Kwon; Myles T Foreman; Qinglan Huang; Hakan Inan; Sailaja Kesiraju; Phuong Le; Sung Jun Lim; Andrew M Smith; Richard C Zangar; Utkan Demirci; Karen S Anderson; Brian T Cunningham
Journal:  IEEE Sens J       Date:  2017-11-24       Impact factor: 3.301

5.  Susceptibility to quantum dot induced lung inflammation differs widely among the Collaborative Cross founder mouse strains.

Authors:  David K Scoville; Collin C White; Dianne Botta; Lisa A McConnachie; Megan E Zadworny; Stefanie C Schmuck; Xiaoge Hu; Xiaohu Gao; Jianbo Yu; Russell L Dills; Lianne Sheppard; Martha A Delaney; William C Griffith; Richard P Beyer; Richard C Zangar; Joel G Pounds; Elaine M Faustman; Terrance J Kavanagh
Journal:  Toxicol Appl Pharmacol       Date:  2015-10-21       Impact factor: 4.219

6.  Development of an ELISA microarray assay for the sensitive and simultaneous detection of ten biodefense toxins.

Authors:  Kathryn L Jenko; Yanfeng Zhang; Yulia Kostenko; Yongfeng Fan; Consuelo Garcia-Rodriguez; Jianlong Lou; James D Marks; Susan M Varnum
Journal:  Analyst       Date:  2014-08-12       Impact factor: 4.616

7.  Reactive oxygen species alter autocrine and paracrine signaling.

Authors:  Richard C Zangar; Nikki Bollinger; Thomas J Weber; Ruimin M Tan; L Meng Markillie; Norman J Karin
Journal:  Free Radic Biol Med       Date:  2011-09-10       Impact factor: 7.376

8.  Comparative proteomics and pulmonary toxicity of instilled single-walled carbon nanotubes, crocidolite asbestos, and ultrafine carbon black in mice.

Authors:  Justin G Teeguarden; Bobbie-Jo Webb-Robertson; Katrina M Waters; Ashley R Murray; Elena R Kisin; Susan M Varnum; Jon M Jacobs; Joel G Pounds; Richard C Zanger; Anna A Shvedova
Journal:  Toxicol Sci       Date:  2010-12-06       Impact factor: 4.849

9.  Application of photonic crystal enhanced fluorescence to cancer biomarker microarrays.

Authors:  Cheng-Sheng Huang; Sherine George; Meng Lu; Vikram Chaudhery; Ruimin Tan; Richard C Zangar; Brian T Cunningham
Journal:  Anal Chem       Date:  2011-01-21       Impact factor: 6.986

10.  Evaluation of surface chemistries for antibody microarrays.

Authors:  Shannon L Seurynck-Servoss; Amanda M White; Cheryl L Baird; Karin D Rodland; Richard C Zangar
Journal:  Anal Biochem       Date:  2007-07-25       Impact factor: 3.365
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.