Literature DB >> 16593849

Evidence for the involvement of more than one metal cation in the Schiff base deprotonation process during the photocycle of bacteriorhodopsin.

T C Corcoran1, K Z Ismail, M A El-Sayed.   

Abstract

The removal of metal cations inhibits the deprotonation process of the protonated Schiff base during the photocycle of bacteriorhodopsin. To understand the nature of the involvement of these cations, a spectroscopic and kinetic study was carried out on bacteriorhodopsin samples in which the native Ca(2+) and Mg(2+) were replaced by Eu(3+), a luminescent cation. The decay of Eu(3+) emission in bacteriorhodopsin can be fitted to a minimum of three decay components, which are assigned to Eu(3+) emission from three different sites. This is supported by the response of the decay components to the presence of (2)H(2)O and to the changes in the Eu(3+)/bR molar ratio. The number of water molecules coordinated to Eu(3+) in each site is determined from the change in its emission lifetime when (2)H(2)O replaces H(2)O. Most of the emission originates from two "wet" sites of low crystal-field symmetry-e.g., surface sites. Protonated Schiff base deprotonation has no discernable effect on the emission decay of protein-bound Eu(3+), suggesting an indirect involvement of metal cations in the deprotonation process. Adding Eu(3+) to deionized bacteriorhodopsin increases the emission intensity of each Eu(3+) site linearly, but the extent of the deprotonation (and color) changes sigmoidally. This suggests that if only the emitting Eu(3+) ions cause the deprotonation and bacteriorhodopsin color change, ions in more than one site must be involved-e.g., by inducing protein conformation changes. The latter could allow deprotonation by the interaction between the protonated Schiff base and a positive field of cations either on the surface or within the protein.

Entities:  

Year:  1987        PMID: 16593849      PMCID: PMC305029          DOI: 10.1073/pnas.84.12.4094

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  Improved isolation procedures for the purple membrane of Halobacterium halobium.

Authors:  B M Becher; J Y Cassim
Journal:  Prep Biochem       Date:  1975

2.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.

Authors:  R H Lozier; R A Bogomolni; W Stoeckenius
Journal:  Biophys J       Date:  1975-09       Impact factor: 4.033

3.  Cation binding sites on the projected structure of bacteriorhodopsin.

Authors:  N V Katre; Y Kimura; R M Stroud
Journal:  Biophys J       Date:  1986-08       Impact factor: 4.033

4.  Kinetic interaction between aromatic residues and the retinal chromophore of bacteriorhodopsin during the photocycle.

Authors:  B Hess; D Kuschmitz
Journal:  FEBS Lett       Date:  1979-04-15       Impact factor: 4.124

5.  Isolation of the cell membrane of Halobacterium halobium and its fractionation into red and purple membrane.

Authors:  D Oesterhelt; W Stoeckenius
Journal:  Methods Enzymol       Date:  1974       Impact factor: 1.600

6.  Tunable laser resonance raman spectroscopy of bacteriorhodopsin.

Authors:  A Lewis; J Spoonhower; R A Bogomolni; R H Lozier; W Stoeckenius
Journal:  Proc Natl Acad Sci U S A       Date:  1974-11       Impact factor: 11.205

7.  Effect of acid pH on the absorption spectra and photoreactions of bacteriorhodopsin.

Authors:  P C Mowery; R H Lozier; Q Chae; Y W Tseng; M Taylor; W Stoeckenius
Journal:  Biochemistry       Date:  1979-09-18       Impact factor: 3.162

8.  Photoreceptor protein from the purple membrane of Halobacterium halobium. Molecular weight and retinal binding site.

Authors:  J Bridgen; I D Walker
Journal:  Biochemistry       Date:  1976-02-24       Impact factor: 3.162

9.  Light-driven protonation changes of internal aspartic acids of bacteriorhodopsin: an investigation by static and time-resolved infrared difference spectroscopy using [4-13C]aspartic acid labeled purple membrane.

Authors:  M Engelhard; K Gerwert; B Hess; W Kreutz; F Siebert
Journal:  Biochemistry       Date:  1985-01-15       Impact factor: 3.162

10.  Characterization of metal ion-binding sites in bacteriorhodopsin.

Authors:  M Ariki; J K Lanyi
Journal:  J Biol Chem       Date:  1986-06-25       Impact factor: 5.157

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  16 in total

1.  Binding of calcium ions to bacteriorhodopsin.

Authors:  G Váró; L S Brown; R Needleman; J K Lanyi
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

2.  Nature of the individual Ca binding sites in Ca-regenerated bacteriorhodopsin.

Authors:  Y N Zhang; L L Sweetman; E S Awad; M A El-Sayed
Journal:  Biophys J       Date:  1992-05       Impact factor: 4.033

3.  Angle of the retinal of bacteriorhodopsin in blue membrane.

Authors:  R Tóth-Boconádi; S G Taneva; L Keszthelyi
Journal:  Biophys J       Date:  1989-08       Impact factor: 4.033

4.  Studies of cation binding in ZnCl2-regenerated bacteriorhodopsin by x-ray absorption fine structures: effects of removing water molecules and adding Cl- ions.

Authors:  K Zhang; L Song; J Dong; M A El-Sayed
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

5.  Deprotonation of lipid-depleted bacteriorhodopsin.

Authors:  D J Jang; M A el-Sayed
Journal:  Proc Natl Acad Sci U S A       Date:  1988-08       Impact factor: 11.205

6.  Time-resolved Fourier transform infrared spectroscopy of the polarizable proton continua and the proton pump mechanism of bacteriorhodopsin.

Authors:  J Wang; M A El-Sayed
Journal:  Biophys J       Date:  2001-02       Impact factor: 4.033

7.  High sensitivity electron diffraction analysis. A study of divalent cation binding to purple membrane.

Authors:  A K Mitra; R M Stroud
Journal:  Biophys J       Date:  1990-02       Impact factor: 4.033

8.  Surface pH controls purple-to-blue transition of bacteriorhodopsin. A theoretical model of purple membrane surface.

Authors:  I Szundi; W Stoeckenius
Journal:  Biophys J       Date:  1989-08       Impact factor: 4.033

9.  Effect of genetic modification of tyrosine-185 on the proton pump and the blue-to-purple transition in bacteriorhodopsin.

Authors:  D J Jang; M A el-Sayed; L J Stern; T Mogi; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

10.  Effects of genetic replacements of charged and H-bonding residues in the retinal pocket on Ca2+ binding to deionized bacteriorhodopsin.

Authors:  Y N Zhang; M A el-Sayed; M L Bonet; J K Lanyi; M Chang; B Ni; R Needleman
Journal:  Proc Natl Acad Sci U S A       Date:  1993-02-15       Impact factor: 11.205

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