Literature DB >> 2349220

Effect of genetic modification of tyrosine-185 on the proton pump and the blue-to-purple transition in bacteriorhodopsin.

D J Jang1, M A el-Sayed, L J Stern, T Mogi, H G Khorana.   

Abstract

The retinylidene chromophore mutant (Y185F) of bacteriorhodopsin, in which Tyr-185 is substituted by phenylalanine, is examined and compared with wild-type bacteriorhodopsin expressed in Escherichia coli; both were reinstituted similarly in vesicles. The Y185F mutant shows (at least) two distinct spectra at neutral pH. Upon light absorption, the blue species (which absorbs in the red) behaves as if "dead"--i.e., neither its tyrosine nor its protonated Schiff base undergoes deprotonation nor does its tryptophan fluorescence undergo quenching. This result is unlike either the purple species (which absorbs in the blue) or wild-type bacteriorhodopsin expressed in E. coli. As the pH increases, both the color changes and the protonated Schiff base deprotonation efficiency suggest a blue-to-purple transition of the Y185F mutant near pH 9. If this blue-to-purple transition of Y185F corresponds to the blue-to-purple transition of purple-membrane (native) bacteriorhodopsin (occurring at pH 2.6) and of wild-type bacteriorhodopsin expressed in E. coli (occurring at pH 5), the protein-conformation changes of this transition as well as the protonated Schiff base deprotonation may be controlled not by surface pH alone, but rather by the coupling between surface potential and the general protein internal structure around the active site. The results also suggest that Tyr-185 does not deprotonate during the photocycle in purple-membrane bacteriorhodopsin.

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Year:  1990        PMID: 2349220      PMCID: PMC54055          DOI: 10.1073/pnas.87.11.4103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

Review 1.  Bacteriorhodopsin and the purple membrane of halobacteria.

Authors:  W Stoeckenius; R H Lozier; R A Bogomolni
Journal:  Biochim Biophys Acta       Date:  1979-03-14

Review 2.  Calculations of electrostatic interactions in biological systems and in solutions.

Authors:  A Warshel; S T Russell
Journal:  Q Rev Biophys       Date:  1984-08       Impact factor: 5.318

3.  Interpretations of the effects of pH on the spectra of purple membrane.

Authors:  D D Muccio; J Y Cassim
Journal:  J Mol Biol       Date:  1979-12-15       Impact factor: 5.469

4.  Time-resolved protein fluorescence studies of intermediates in the photochemical cycle of bacteriorhodopsin.

Authors:  J M Fukumoto; W D Hopewell; B Karvaly; M A El-Sayed
Journal:  Proc Natl Acad Sci U S A       Date:  1981-01       Impact factor: 11.205

5.  Site of attachment of retinal in bacteriorhodopsin.

Authors:  H Bayley; K S Huang; R Radhakrishnan; A H Ross; Y Takagaki; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1981-04       Impact factor: 11.205

6.  Proton conduction in bacteriorhodopsin via a hydrogen-bonded chain with large proton polarizability.

Authors:  H Merz; G Zundel
Journal:  Biochem Biophys Res Commun       Date:  1981-07-30       Impact factor: 3.575

7.  Effect of acid pH on the absorption spectra and photoreactions of bacteriorhodopsin.

Authors:  P C Mowery; R H Lozier; Q Chae; Y W Tseng; M Taylor; W Stoeckenius
Journal:  Biochemistry       Date:  1979-09-18       Impact factor: 3.162

8.  On the molecular mechanisms of the Schiff base deprotonation during the bacteriorhodopsin photocycle.

Authors:  E L Chronister; T C Corcoran; L Song; M A El-Sayed
Journal:  Proc Natl Acad Sci U S A       Date:  1986-11       Impact factor: 11.205

9.  Aspartic acid substitutions affect proton translocation by bacteriorhodopsin.

Authors:  T Mogi; L J Stern; T Marti; B H Chao; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

10.  Replacement of aspartic acid-96 by asparagine in bacteriorhodopsin slows both the decay of the M intermediate and the associated proton movement.

Authors:  M Holz; L A Drachev; T Mogi; H Otto; A D Kaulen; M P Heyn; V P Skulachev; H G Khorana
Journal:  Proc Natl Acad Sci U S A       Date:  1989-04       Impact factor: 11.205

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  5 in total

1.  Protein-assisted pericyclic reactions: an alternate hypothesis for the action of quantal receptors.

Authors:  W Radding; T Romo; G N Phillips
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

2.  Circular dichroism and photocycle kinetics of partially detergent solubilized and partially retinal regenerated bacteriorhodopsin.

Authors:  S Wu; E S Awad; M A El-Sayed
Journal:  Biophys J       Date:  1991-01       Impact factor: 4.033

Review 3.  Factors influencing the energetics of electron and proton transfers in proteins. What can be learned from calculations.

Authors:  M R Gunner; Junjun Mao; Yifan Song; Jinrang Kim
Journal:  Biochim Biophys Acta       Date:  2006-06-17

4.  Effects of individual genetic substitutions of arginine residues on the deprotonation and reprotonation kinetics of the Schiff base during the bacteriorhodopsin photocycle.

Authors:  G C Lin; M A el-Sayed; T Marti; L J Stern; T Mogi; H G Khorana
Journal:  Biophys J       Date:  1991-07       Impact factor: 4.033

5.  Dynamic Coupling of Tyrosine 185 with the Bacteriorhodopsin Photocycle, as Revealed by Chemical Shifts, Assisted AF-QM/MM Calculations and Molecular Dynamic Simulations.

Authors:  Sijin Chen; Xiaoyan Ding; Chao Sun; Anthony Watts; Xiao He; Xin Zhao
Journal:  Int J Mol Sci       Date:  2021-12-18       Impact factor: 5.923

  5 in total

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