Literature DB >> 16593576

Nodulin-24 gene of soybean codes for a peptide of the peribacteroid membrane and was generated by tandem duplication of a sequence resembling an insertion element.

P Katinakis1, D P Verma.   

Abstract

A nodulin gene coding for a polypeptide with an apparent M(r) of 24,000 (nodulin-24) was isolated from soybean (Glycine max). DNA sequence analysis of this gene revealed that its coding capacity is for a polypeptide of only M(r) 15,100 and is interrupted by four introns. The three middle exons and their flanking segments appear to have been generated by duplications of a unit resembling an insertion sequence. This unit is bounded by a 12-base-pair inverted repeat and encompasses the 54-base-pair exon corresponding to each of three central hydrophobic domains of the protein, nodulin-24. The resulting repeated hydrophobic structure of this protein may be responsible for an apparent increase in M(r) from 15,100 to 24,000. In vitro translation and immunological studies suggest that nodulin-24 is a precursor and is processed cotranslationally into a M(r) 20,000 polypeptide. This polypeptide is a component of the membrane envelope enclosing the bacteroids (peribacteroid membrane) synthesized during symbiosis with Rhizobium. The low degree (<6%) of sequence divergence among the repeated units suggests that this gene has been generated recently during the evolution of symbiotic nitrogen fixation in soybean.

Entities:  

Year:  1985        PMID: 16593576      PMCID: PMC397954          DOI: 10.1073/pnas.82.12.4157

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

3.  Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.

Authors:  G M Wahl; M Stern; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

4.  Screening lambdagt recombinant clones by hybridization to single plaques in situ.

Authors:  W D Benton; R W Davis
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

5.  The isolation of structural genes from libraries of eucaryotic DNA.

Authors:  T Maniatis; R C Hardison; E Lacy; J Lauer; C O'Connell; D Quon; G K Sim; A Efstratiadis
Journal:  Cell       Date:  1978-10       Impact factor: 41.582

6.  Why genes in pieces?

Authors:  W Gilbert
Journal:  Nature       Date:  1978-02-09       Impact factor: 49.962

7.  Soybean nodulin genes: Analysis of cDNA clones reveals several major tissue-specific sequences in nitrogen-fixing root nodules.

Authors:  F Fuller; P W Künstner; T Nguyen; D P Verma
Journal:  Proc Natl Acad Sci U S A       Date:  1983-05       Impact factor: 11.205

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Post-translational cleavage of presecretory proteins with an extract of rough microsomes from dog pancreas containing signal peptidase activity.

Authors:  R C Jackson; G Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  Isolation and characterization of the membrane envelope enclosing the bacteroids in soybean root nodules.

Authors:  D P Verma; V Kazazian; V Zogbi; A K Bal
Journal:  J Cell Biol       Date:  1978-09       Impact factor: 10.539

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  35 in total

1.  The nodulin 24 protein family shows similarity to a family of glycine-rich plant proteins.

Authors:  N N Sandal; K Bojsen; H Richter; C Sengupta-Gopalan; K A Marcker
Journal:  Plant Mol Biol       Date:  1992-02       Impact factor: 4.076

2.  Codon usage in plant genes.

Authors:  E E Murray; J Lotzer; M Eberle
Journal:  Nucleic Acids Res       Date:  1989-01-25       Impact factor: 16.971

Review 3.  A reappraisal of non-consensus mRNA splice sites.

Authors:  I J Jackson
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

4.  Signals in Root Nodule Organogenesis and Endocytosis of Rhizobium.

Authors:  DPS. Verma
Journal:  Plant Cell       Date:  1992-04       Impact factor: 11.277

5.  A block in the endocytosis of Rhizobium allows cellular differentiation in nodules but affects the expression of some peribacteroid membrane nodulins.

Authors:  N Morrison; D P Verma
Journal:  Plant Mol Biol       Date:  1987-05       Impact factor: 4.076

6.  Bacteroid-encoded proteins are secreted into the peribacteroid space by Rhizobium leguminosarum.

Authors:  P Katinakis; R M Lankhorst; J Louwerse; A van Kammen; R C van den Bos
Journal:  Plant Mol Biol       Date:  1988-03       Impact factor: 4.076

7.  cDNA cloning and developmental expression of pea nodulin genes.

Authors:  F Govers; J P Nap; M Moerman; H J Franssen; A van Kammen; T Bisseling
Journal:  Plant Mol Biol       Date:  1987-09       Impact factor: 4.076

8.  Isolation and characterization of novel nodulin cDNAs representing genes expressed at early stages of soybean nodule development.

Authors:  H Kouchi; S Hata
Journal:  Mol Gen Genet       Date:  1993-04

9.  Characterization and genomic organization of a highly expressed late nodulin gene subfamily in soybeans.

Authors:  H E Richter; N N Sandal; K A Marcker; C Sengupta-Gopalan
Journal:  Mol Gen Genet       Date:  1991-10

10.  Morphological and Molecular Characteristics of Host-Conditioned Ineffective Root Nodules in Cowpea.

Authors:  D. Purdom; A. T. Trese
Journal:  Plant Physiol       Date:  1995-09       Impact factor: 8.340

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