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Literature DB >> 16593561

Tobacco chloroplast tRNA(UUU) gene contains a 2.5-kilobase-pair intron: An open reading frame and a conserved boundary sequence in the intron.

Abstract

The nucleotide sequence of a tRNA(Lys)(UUU) gene on tobacco (Nicotiana tabacum) chloroplast DNA has been determined. This gene is located 215 base pairs upstream from the gene for the 32,000-dalton thylakoid membrane protein on the same DNA strand and has a 2526-base-pair intron in the anticodon loop. The intron boundary sequence does not follow the G-U/A-G rule but is similar to those of tobacco chloroplast split genes for tRNA(Gly)(UCC) and ribosomal proteins L2 and S12. The intron contains one major open reading frame of 509 codons. The codon usage in the open reading frame resembles those observed in the genes for tobacco chloroplast proteins so far analyzed. The primary transcript of this tRNA gene is 2.7 kilobases long.

Entities: Chemical Species

Year: 1985 PMID： 16593561 PMCID： PMC397824 DOI： 10.1073/pnas.82.11.3557

Source DB: PubMed Journal: Proc Natl Acad Sci U S A ISSN： 0027-8424 Impact factor: 11.205

16 in total

1. Nucleotide sequences of tobacco chloroplast genes for elongator tRNAMet and tRNAVal (UAC): the tRNAVal (UAC) gene contains a long intron.

Authors: H Deno; A Kato; K Shinozaki; M Sugiura
Journal: Nucleic Acids Res Date: 1982-12-11 Impact factor: 16.971

2. Nucleotide sequence of the 16S - 23S spacer region in an rRNA gene cluster from tobacco chloroplast DNA.

Authors: F Takaiwa; M Sugiura
Journal: Nucleic Acids Res Date: 1982-04-24 Impact factor: 16.971

3. The anticodon of the maize chloroplast gene for tRNA Leu UAA is split by a large intron.

Authors: A Steinmetz; E J Gubbins; L Bogorad
Journal: Nucleic Acids Res Date: 1982-05-25 Impact factor: 16.971

4. Chloroplast tRNA gene contains a long intron in the D stem: Nucleotide sequences of tobacco chloroplast genes for tRNA (UCC) and tRNA (UCU).

Authors: H Deno; M Sugiura
Journal: Proc Natl Acad Sci U S A Date: 1984-01 Impact factor: 11.205

5. Junctions of the large single copy region and the inverted repeats in Spinacia oleracea and Nicotiana debneyi chloroplast DNA: sequence of the genes for tRNAHis and the ribosomal proteins S19 and L2.

Authors: G Zurawski; W Bottomley; P R Whitfeld
Journal: Nucleic Acids Res Date: 1984-08-24 Impact factor: 16.971

6. Self-splicing RNA: autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena.

Authors: K Kruger; P J Grabowski; A J Zaug; J Sands; D E Gottschling; T R Cech
Journal: Cell Date: 1982-11 Impact factor: 41.582

7. The barley chloroplast DNA atpBE, trnM2, and trnV1 loci.

Authors: G Zurawski; M T Clegg
Journal: Nucleic Acids Res Date: 1984-03-12 Impact factor: 16.971

8. Nine introns with conserved boundary sequences in the Euglena gracilis chloroplast ribulose-1,5-bisphosphate carboxylase gene.

Authors: B Koller; J C Gingrich; G L Stiegler; M A Farley; H Delius; R B Hallick
Journal: Cell Date: 1984-02 Impact factor: 41.582

9. Intron within the large rRNA gene of N. crassa mitochondria: a long open reading frame and a consensus sequence possibly important in splicing.

Authors: J M Burke; U L RajBhandary
Journal: Cell Date: 1982-12 Impact factor: 41.582

10. Conservation of RNA secondary structures in two intron families including mitochondrial-, chloroplast- and nuclear-encoded members.

Authors: F Michel; B Dujon
Journal: EMBO J Date: 1983 Impact factor: 11.598

35 in total

1. The chloroplast psbK operon from mustard (Sinapis alba L.): multiple transcripts during seedling development and evidence for divergent overlapping transcription.

Authors: H Neuhaus; G Link
Journal: Curr Genet Date: 1990-11 Impact factor: 3.886

2. Compilation of tRNA sequences and sequences of tRNA genes.

Authors: M Sprinzl; N Dank; S Nock; A Schön
Journal: Nucleic Acids Res Date: 1991-04-25 Impact factor: 16.971

3. Sequence and transcriptional analysis of the barley ctDNA region upstream of psbD-psbC encoding trnK(UUU), rps16, trnQ(UUG), psbK, psbI, and trnS(GCU).

Authors: T Berends Sexton; J T Jones; J E Mullet
Journal: Curr Genet Date: 1990-05 Impact factor: 3.886

4. RNA-protein interactions at transcript 3' ends and evidence for trnK-psbA cotranscription in mustard chloroplasts.

Authors: J Nickelsen; G Link
Journal: Mol Gen Genet Date: 1991-08

5. Transcript levels of two adjacent chloroplast genes during mustard (Sinapis alba L.) seedling development are under differential temporal and light control.

Authors: J E Hughes; H Neuhaus; G Link
Journal: Plant Mol Biol Date: 1987-07 Impact factor: 4.076

10. Gene organization and newly identified groups of genes of the chloroplast genome from a liverwort, Marchantia polymorpha.

Authors: K Ohyama; T Kohchi; H Fukuzawa; T Sano; K Umesono; H Ozeki
Journal: Photosynth Res Date: 1988-04 Impact factor: 3.573