Literature DB >> 8980485

Regulation of gene expression in chloroplasts of higher plants.

M Sugita1, M Sugiura.   

Abstract

Chloroplasts contain their own genetic system which has a number of prokaryotic as well as some eukaryotic features. Most chloroplast genes of higher plants are organized in clusters and are cotranscribed as polycistronic pre-RNAs which are generally processes into many shorter overlapping RNA species, each of which accumulates of steady-state RNA levels. This indicates that posttranscriptional RNA processing of primary transcripts is an important step in the control of chloroplast gene expression. Chloroplast RNA processing steps include RNA cleavage/trimming, RNA splicing, ENA editing and RNA stabilization. Several chloroplast genes are interrupted by introns and therefore require processing for gene function. In tobacco chloroplasts, 18 genes contain introns, six for tRNA genes and 12 for protein-encoding genes. A number of specific proteins and RNA factors are believed to be involved in splicing and maturation of pre-RNAs in chloroplasts. Processing enzymes and RNA-binding proteins which could be involved in posttranscriptional steps have been identified in the last several years. Our current knowledge of the regulation of gene expression in chloroplasts of higher plants is overviewed and further studies on this matter are also considered.

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Year:  1996        PMID: 8980485     DOI: 10.1007/bf00039388

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  73 in total

1.  RNA-Binding Protein from Arabidopsis.

Authors:  A. J. DeLisle
Journal:  Plant Physiol       Date:  1993-05       Impact factor: 8.340

2.  Control of mRNA stability in chloroplasts by 3' inverted repeats: effects of stem and loop mutations on degradation of psbA mRNA in vitro.

Authors:  C C Adams; D B Stern
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

Review 3.  The chloroplast genome.

Authors:  M Sugiura
Journal:  Plant Mol Biol       Date:  1992-05       Impact factor: 4.076

4.  Impaired splicing of the rps12 transcript in ribosome-deficient plastids.

Authors:  T Hübschmann; W R Hess; T Börner
Journal:  Plant Mol Biol       Date:  1996-01       Impact factor: 4.076

5.  Inefficient rpl2 splicing in barley mutants with ribosome-deficient plastids.

Authors:  W R Hess; B Hoch; P Zeltz; T Hübschmann; H Kössel; T Börner
Journal:  Plant Cell       Date:  1994-10       Impact factor: 11.277

6.  Ribosome-binding sites on chloroplast rbcL and psbA mRNAs and light-induced initiation of D1 translation.

Authors:  J Kim; J E Mullet
Journal:  Plant Mol Biol       Date:  1994-06       Impact factor: 4.076

7.  Phosphorylation of a chloroplast RNA-binding protein changes its affinity to RNA.

Authors:  I Lisitsky; G Schuster
Journal:  Nucleic Acids Res       Date:  1995-07-11       Impact factor: 16.971

8.  Light-induced switch in barley psbD-psbC promoter utilization: a novel mechanism regulating chloroplast gene expression.

Authors:  T B Sexton; D A Christopher; J E Mullet
Journal:  EMBO J       Date:  1990-12       Impact factor: 11.598

9.  Proteins encoded by a complex chloroplast transcription unit are each translated from both monocistronic and polycistronic mRNAs.

Authors:  A Barkan
Journal:  EMBO J       Date:  1988-09       Impact factor: 11.598

10.  A methyl jasmonate-induced shift in the length of the 5' untranslated region impairs translation of the plastid rbcL transcript in barley.

Authors:  S Reinbothe; C Reinbothe; C Heintzen; C Seidenbecher; B Parthier
Journal:  EMBO J       Date:  1993-04       Impact factor: 11.598

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  88 in total

1.  Sequences downstream of the translation initiation codon are important determinants of translation efficiency in chloroplasts.

Authors:  H Kuroda; P Maliga
Journal:  Plant Physiol       Date:  2001-01       Impact factor: 8.340

2.  Proteomics of the chloroplast: systematic identification and targeting analysis of lumenal and peripheral thylakoid proteins.

Authors:  J B Peltier; G Friso; D E Kalume; P Roepstorff; F Nilsson; I Adamska; K J van Wijk
Journal:  Plant Cell       Date:  2000-03       Impact factor: 11.277

3.  Involvement of a site-specific trans-acting factor and a common RNA-binding protein in the editing of chloroplast mRNAs: development of a chloroplast in vitro RNA editing system.

Authors:  T Hirose; M Sugiura
Journal:  EMBO J       Date:  2001-03-01       Impact factor: 11.598

4.  The sequence and secondary structure of the 3'-UTR affect 3'-end maturation, RNA accumulation, and translation in tobacco chloroplasts.

Authors:  R A Monde; J C Greene; D B Stern
Journal:  Plant Mol Biol       Date:  2000-11       Impact factor: 4.076

Review 5.  Eukaryotic genome evolution: rearrangement and coevolution of compartmentalized genetic information.

Authors:  Reinhold G Herrmann; Rainer M Maier; Christian Schmitz-Linneweber
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

6.  The predicted candidates of Arabidopsis plastid inner envelope membrane proteins and their expression profiles.

Authors:  Abraham J K Koo; John B Ohlrogge
Journal:  Plant Physiol       Date:  2002-10       Impact factor: 8.340

7.  Molecular cloning of the maize gene crp1 reveals similarity between regulators of mitochondrial and chloroplast gene expression.

Authors:  D G Fisk; M B Walker; A Barkan
Journal:  EMBO J       Date:  1999-05-04       Impact factor: 11.598

8.  Tobacco VDL gene encodes a plastid DEAD box RNA helicase and is involved in chloroplast differentiation and plant morphogenesis.

Authors:  Y Wang; G Duby; B Purnelle; M Boutry
Journal:  Plant Cell       Date:  2000-11       Impact factor: 11.277

9.  Dicistronic expression of the green fluorescent protein and antibiotic resistance genes in the plastid for selection and tracking of plastid-transformed cells in tobacco.

Authors:  S-W Jeong; W-J Jeong; J-W Woo; D-W Choi; Y I Park; J R Liu
Journal:  Plant Cell Rep       Date:  2004-01-21       Impact factor: 4.570

10.  Antisense transcript and RNA processing alterations suppress instability of polyadenylated mRNA in chlamydomonas chloroplasts.

Authors:  Yoshiki Nishimura; Elise A Kikis; Sara L Zimmer; Yutaka Komine; David B Stern
Journal:  Plant Cell       Date:  2004-10-14       Impact factor: 11.277

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