Literature DB >> 16592816

A suggestion for naming faces of ring compounds.

I A Rose1, K R Hanson, K D Wilkinson, M J Wimmer.   

Abstract

Discussion of the topology of interaction of ring compounds with macromolecules and receptors requires a system for naming the faces of the cyclic compound. An alpha/beta-face nomenclature is suggested that is based on the clockwise/counterclockwise direction of ascending numbering in the ring with the lowest numbered unshared ring atom. This system is applicable to a very broad range of compounds: sugars, cyclic bases, steroids, cyclitols, porphyrins, etc., and molecules with a single ring, fused rings, encompassing rings, and rings formed by head-to-tail polymerization.

Entities:  

Year:  1980        PMID: 16592816      PMCID: PMC349414          DOI: 10.1073/pnas.77.5.2439

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  4 in total

1.  Structure of a dinucleoside phosphate--drug complex as model for nucleic acid--drug interaction.

Authors:  S Neidle; A Achari; G L Taylor; H M Berman; H L Carrell; J P Glusker; W C Stallings
Journal:  Nature       Date:  1977-09-22       Impact factor: 49.962

2.  Conformation of nicotinamide adenine dinucleotide bound to cytoplasmic malate dehydrogenase.

Authors:  L E Webb; E J Hill; L J Banaszak
Journal:  Biochemistry       Date:  1973-12-04       Impact factor: 3.162

3.  Specificity for the glucose-6-P inhibition site of hexokinase.

Authors:  I A Rose; J V Warms; D P Kosow
Journal:  Arch Biochem Biophys       Date:  1974-10       Impact factor: 4.013

Review 4.  Concepts and perspectives in enzyme stereochemistry.

Authors:  K R Hanson
Journal:  Annu Rev Biochem       Date:  1976       Impact factor: 23.643

  4 in total
  21 in total

1.  3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures.

Authors:  Xiang-Jun Lu; Wilma K Olson
Journal:  Nucleic Acids Res       Date:  2003-09-01       Impact factor: 16.971

2.  A comprehensive classification of nucleic acid structural families based on strand direction and base pairing.

Authors:  R Lavery; K Zakrzewska; J S Sun; S C Harvey
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

3.  Regio- and stereospecificity of filipin hydroxylation sites revealed by crystal structures of cytochrome P450 105P1 and 105D6 from Streptomyces avermitilis.

Authors:  Lian-Hua Xu; Shinya Fushinobu; Satoshi Takamatsu; Takayoshi Wakagi; Haruo Ikeda; Hirofumi Shoun
Journal:  J Biol Chem       Date:  2010-04-07       Impact factor: 5.157

4.  The primary structures of the Archaeon Halobacterium salinarium blue light receptor sensory rhodopsin II and its transducer, a methyl-accepting protein.

Authors:  W Zhang; A Brooun; M M Mueller; M Alam
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

5.  Chain folding and A:T pairing in human telomeric DNA: a model-building and molecular dynamics study.

Authors:  D Mohanty; M Bansal
Journal:  Biophys J       Date:  1995-09       Impact factor: 4.033

6.  DNA structural dynamics: longitudinal breathing as a possible mechanism for the B in equilibrium Z transition.

Authors:  S C Harvey
Journal:  Nucleic Acids Res       Date:  1983-07-25       Impact factor: 16.971

7.  Remarkable stereospecific conjugate additions to the Hsp90 inhibitor celastrol.

Authors:  Lada Klaić; Paul C Trippier; Rama K Mishra; Richard I Morimoto; Richard B Silverman
Journal:  J Am Chem Soc       Date:  2011-11-21       Impact factor: 15.419

8.  Signal transduction in the archaeon Halobacterium salinarium is processed through three subfamilies of 13 soluble and membrane-bound transducer proteins.

Authors:  W Zhang; A Brooun; J McCandless; P Banda; M Alam
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

9.  The conformation of abscisic acid by n.m.r. and a revision of the proposed mechanism for cyclization during its biosynthesis.

Authors:  B V Milborrow
Journal:  Biochem J       Date:  1984-05-15       Impact factor: 3.857

10.  The insertion and transport of anandamide in synthetic lipid membranes are both cholesterol-dependent.

Authors:  Eric Di Pasquale; Henri Chahinian; Patrick Sanchez; Jacques Fantini
Journal:  PLoS One       Date:  2009-03-30       Impact factor: 3.240

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