Literature DB >> 16592635

Conformation of uncomplexed natural antamanide crystallized from CH(3)CN/H(2)O.

I L Karle1, T Wieland, D Schermer, H C Ottenheym.   

Abstract

Natural antamanide, a cyclic decapeptide from Amanita phalloides, has been shown to have the same conformation for the backbone and comparable side groups as the biologically active synthetic [Phe(4), Val(6)]antamanide. Packing in the crystal is quite different for the two compounds. Large channels with a polar lining are formed in the crystals of [Phe(4), Val(6)]antamanide, whereas in natural antamanide large channels in the crystal are completely surrounded by the lipophilic side groups of the Pro, Phe, and Ala residues. Antamanide, C(64)H(78)N(10)O(10).8H(2)O.X, crystallizes in space group P2(1)2(1)2(1) with a = 15.88 A, b = 34.88 A, and c = 13.61 A.

Entities:  

Year:  1979        PMID: 16592635      PMCID: PMC383422          DOI: 10.1073/pnas.76.4.1532

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  6 in total

1.  Membrane proteins: amino acid sequence and membrane penetration.

Authors:  J P Segrest; R J Feldmann
Journal:  J Mol Biol       Date:  1974-08-25       Impact factor: 5.469

2.  The conformation of the sodium complex of a biologically active analog of antamanide in the crystalline state.

Authors:  I L Karle
Journal:  Biochemistry       Date:  1974-05-07       Impact factor: 3.162

3.  Conformation of the lithium ion complex of antamanide, a cyclic decapeptide and ion carrier, in the crystalline state.

Authors:  I L Karle
Journal:  J Am Chem Soc       Date:  1974-06-12       Impact factor: 15.419

4.  Conformations of the li-antamanide complex and na-[phe, val]antamanide complex in the crystalline state.

Authors:  I L Karle; J Karle; T Wieland; W Burgermeister; H Faulstich; B Witkop
Journal:  Proc Natl Acad Sci U S A       Date:  1973-06       Impact factor: 11.205

5.  [Phe4, Val6]antamanide crystallized from methyl acetate/n-hexane. Conformation and packing.

Authors:  I L Karle
Journal:  J Am Chem Soc       Date:  1977-07-20       Impact factor: 15.419

6.  Arrangement of water molecules in cavities and channels of the lattice of [Phe4Val6]antamanide dodecahydrate.

Authors:  I L Karle; E Duesler
Journal:  Proc Natl Acad Sci U S A       Date:  1977-07       Impact factor: 11.205

  6 in total
  11 in total

1.  Triplet phase invariants: Formula for acentric case from fourth-order determinantal joint probability distributions.

Authors:  J Karle
Journal:  Proc Natl Acad Sci U S A       Date:  1980-01       Impact factor: 11.205

2.  On using time-averaging restraints in molecular dynamics simulation.

Authors:  W R Scott; A E Mark; W F van Gunsteren
Journal:  J Biomol NMR       Date:  1998-11       Impact factor: 2.835

3.  Structure of the hydrophobic protein crambin determined directly from the anomalous scattering of sulphur.

Authors:  Wayne A Hendrickson; Martha M Teeter
Journal:  Nature       Date:  1981-03-12       Impact factor: 49.962

4.  Structure refinement using time-averaged J-coupling constant restraints.

Authors:  A E Torda; R M Brunne; T Huber; H Kessler; W F van Gunsteren
Journal:  J Biomol NMR       Date:  1993-01       Impact factor: 2.835

5.  Methods for sequential resonance assignment in solid, uniformly 13C, 15N labelled peptides: quantification and application to antamanide.

Authors:  A Detken; E H Hardy; M Ernst; M Kainosho; T Kawakami; S Aimoto; B H Meier
Journal:  J Biomol NMR       Date:  2001-07       Impact factor: 2.835

6.  Conformation of cyclo(Gly-L-Pro-L-Pro-Gly-L-Pro-L-Pro)(2)Mg complex crystallized from CH(3)CN solution.

Authors:  I L Karle; J Karle
Journal:  Proc Natl Acad Sci U S A       Date:  1981-02       Impact factor: 11.205

7.  Investigations of peptide hydration using NMR and molecular dynamics simulations: A study of effects of water on the conformation and dynamics of antamanide.

Authors:  J W Peng; C A Schiffer; P Xu; W F van Gunsteren; R R Ernst
Journal:  J Biomol NMR       Date:  1996-12       Impact factor: 2.835

8.  Multi-conformational peptide dynamics derived from NMR data: a new search algorithm and its application to antamanide.

Authors:  R Brüschweiler; M Blackledge; R R Ernst
Journal:  J Biomol NMR       Date:  1991-05       Impact factor: 2.835

9.  Coherent two dimensional infrared spectroscopy of a cyclic decapeptide antamanide. A simulation study of the amide-I and A bands.

Authors:  Cyril Falvo; Tomoyuki Hayashi; Wei Zhuang; Shaul Mukamel
Journal:  J Phys Chem B       Date:  2008-09-09       Impact factor: 2.991

10.  Lithium perhydroantamanide complex (2:1): exposure of the peptide backbone in the analog of antamanide with antitoxic impotency.

Authors:  I L Karle
Journal:  Proc Natl Acad Sci U S A       Date:  1985-11       Impact factor: 11.205

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