Literature DB >> 16592094

Moments of the End-to-End Vector of a Chain Molecule, Its Persistence and Distribution.

P J Flory1.   

Abstract

The persistence vector a is defined as the configurational average of the chain vector r connecting the ends of the molecule and expressed in a reference frame fixed with respect to the first two skeletal bonds. Moments of second and higher orders in the components of r may readily be calculated for real chains in the rotational isomeric state approximation, and from them the corresponding moments of the vector rho = r - a measured from the terminus of a. Development of the density distribution of rho about a is proposed as an alternative to the customary treatment of the density distribution of r about r = 0 on the assumption that this latter distribution should be (approximately) symmetric. Past difficulties in the analysis of cyclization equilibria involving rings of moderate size, such as occur in single strands of polynucleotide chains, conceivably may be overcome by adoption of this alternative.

Entities:  

Year:  1973        PMID: 16592094      PMCID: PMC433604          DOI: 10.1073/pnas.70.6.1819

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  7 in total

1.  MEAN-SQUARE MOMENTS OF CHAIN MOLECULES.

Authors:  P J Flory
Journal:  Proc Natl Acad Sci U S A       Date:  1964-06       Impact factor: 11.205

2.  The nucleic acid distribution function: evaluation of the loop closure probability.

Authors:  C De Lisi
Journal:  Biopolymers       Date:  1972       Impact factor: 2.505

3.  The conformation of single-strand polynucleotides in solution: sedimentation studies of apurinic acid.

Authors:  E K Achter; G Felsenfeld
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

4.  Prediction of RNA secondary structure.

Authors:  C Delisi; D M Crothers
Journal:  Proc Natl Acad Sci U S A       Date:  1971-11       Impact factor: 11.205

5.  Conformation of polyribouridylic acid in solution.

Authors:  L D Inners; G Felsenfeld
Journal:  J Mol Biol       Date:  1970-06-14       Impact factor: 5.469

6.  Spatial configurations of polynucleotide chains. 3. Polydeoxyribonucleotides.

Authors:  W K Olson; P J Flory
Journal:  Biopolymers       Date:  1972-01       Impact factor: 2.505

7.  Studies of the temperature-dependent conformation and phase separation of polyriboadenylic acid solutions at neutral pH.

Authors:  H Eisenberg; G Felsenfeld
Journal:  J Mol Biol       Date:  1967-11-28       Impact factor: 5.469

  7 in total
  5 in total

1.  Distribution of end-to-end distances of oligopeptides in solution as estimated by energy transfer.

Authors:  E Haas; M Wilchek; E Katchalski-Katzir; I Z Steinberg
Journal:  Proc Natl Acad Sci U S A       Date:  1975-05       Impact factor: 11.205

2.  Effects of compact volume and chain stiffness on the conformations of native proteins.

Authors:  M H Hao; S Rackovsky; A Liwo; M R Pincus; H A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  1992-07-15       Impact factor: 11.205

3.  Effects of the nucleoid protein HU on the structure, flexibility, and ring-closure properties of DNA deduced from Monte Carlo simulations.

Authors:  Luke Czapla; David Swigon; Wilma K Olson
Journal:  J Mol Biol       Date:  2008-06-19       Impact factor: 5.469

4.  Nucleosome positioning and composition modulate in silico chromatin flexibility.

Authors:  N Clauvelin; P Lo; O I Kulaeva; E V Nizovtseva; J Diaz-Montes; J Zola; M Parashar; V M Studitsky; W K Olson
Journal:  J Phys Condens Matter       Date:  2015-01-07       Impact factor: 2.333

5.  Resolution of Two Sub-Populations of Conformers and Their Individual Dynamics by Time Resolved Ensemble Level FRET Measurements.

Authors:  Gil Rahamim; Marina Chemerovski-Glikman; Shai Rahimipour; Dan Amir; Elisha Haas
Journal:  PLoS One       Date:  2015-12-23       Impact factor: 3.240

  5 in total

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