Literature DB >> 16591915

On the concept of orbital steering in catalytic reactions.

T C Bruice1, A Brown, D O Harris.   

Abstract

Angular displacement from linear overlap of but a few degrees in the transition state of the enzyme-substrate complex has been postulated to be of great kinetic significance ("orbital steering"). The concept of orbital steering is shown to have evolved from the orientation parameters of an equation previously proposed to evaluate the kinetic importance of propinquity. This equation is shown to be naive. Arguments provided against the concept of orbital steering include: (a) force constants predicted from orbital steering are about 100 times those experimentally determined from displacement of nuclei in a direction normal to the axis of a covalent bond (for example, at room temperature vibrational bending amplitudes of +5 degrees or more are common); (b) because of the lessened directionality of orbitals containing nonbonded electron pairs, the force constants in transition states should be even smaller than in the case of a covalent bond; and (c) molecular orbital calculations predict shallow total energy minima for orbital alignment. The experimental rate data offered as a basis for the concept of orbital steering are shown to find rationalization in the previously observed dependence of DeltaSdouble dagger on kinetic order and the energy requirements for the freezing-out of single bonds in the transition state leading to the formation of medium-size ring compounds from extended ground states. It is concluded that if orbital steering does exist, experimental and theoretical evidence to support this concept have yet to be presented.

Year:  1971        PMID: 16591915      PMCID: PMC389011          DOI: 10.1073/pnas.68.3.658

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  2 in total

1.  INTRAMOLECULAR MODELS DEPICTING THE KINETIC IMPORTANCE OF "FIT" IN ENZYMATIC CATALYSIS.

Authors:  T C Bruice; U K Pandit
Journal:  Proc Natl Acad Sci U S A       Date:  1960-04       Impact factor: 11.205

2.  A source for the special catalytic power of enzymes: orbital steering.

Authors:  D R Storm; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1970-06       Impact factor: 11.205

  2 in total
  8 in total

1.  The far reaches of enzymology.

Authors:  Jesse G Zalatan; Daniel Herschlag
Journal:  Nat Chem Biol       Date:  2009-08       Impact factor: 15.040

Review 2.  Enzyme catalysis as a chain reaction.

Authors:  S E Szedlacsek; R G Duggleby; M O Vlad
Journal:  Biochem J       Date:  1991-11-01       Impact factor: 3.857

Review 3.  On the failure of de novo-designed peptides as biocatalysts.

Authors:  M J Corey; E Corey
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

4.  Computer simulations of enzyme catalysis: finding out what has been optimized by evolution.

Authors:  A Warshel; J Florián
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

5.  Entropic contributions to rate accelerations in enzymic and intramolecular reactions and the chelate effect.

Authors:  M I Page; W P Jencks
Journal:  Proc Natl Acad Sci U S A       Date:  1971-08       Impact factor: 11.205

6.  Theoretical aspects of orbital steering.

Authors:  A Dafforn; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1971-10       Impact factor: 11.205

Review 7.  New directions in the chemistry of natural products: the organic chemist as a pathfinder for biochemistry and medicine.

Authors:  B Witkop
Journal:  Experientia       Date:  1971-10-15

8.  Molecular dynamics simulation of the opposite-base preference and interactions in the active site of formamidopyrimidine-DNA glycosylase.

Authors:  Alexander V Popov; Anton V Endutkin; Yuri N Vorobjev; Dmitry O Zharkov
Journal:  BMC Struct Biol       Date:  2017-05-08
  8 in total

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