Literature DB >> 16582499

Purification, crystallization and preliminary crystallographic analysis of RecA superfamily ATPase PH0284 from Pyrococcus horikoshii OT3.

Bagautdin Bagautdinov1, Naoki Kunishima.   

Abstract

Circadian (daily) protein clocks are found in cyanobacteria, where a complex of the KaiA, KaiB and KaiC proteins generates circadian rhythms. The 28.09 kDa KaiC homologue PH0284 protein from Pyrococcus horikoshii OT3 was cloned and expressed and the purified protein was crystallized by the oil-microbatch method at 295 K. X-ray diffraction data from the crystal were collected to 2.0 angstroms resolution using synchrotron radiation at 100 K. The crystal belongs to the trigonal space group P3(2)21, with unit-cell parameters a = b = 96.06, c = 298.90 angstroms. Assuming the presence of one hexamer in the asymmetric unit gives a V(M) value of 2.36 angstroms3 Da(-1) and a solvent content of 47.9%. A cocrystal with ATP was prepared and a diffraction data set was collected at 2.3 angstroms resolution.

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Year:  2006        PMID: 16582499      PMCID: PMC2222562          DOI: 10.1107/S1744309106009973

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  8 in total

Review 1.  Circadian programs in cyanobacteria: adaptiveness and mechanism.

Authors:  C H Johnson; S S Golden
Journal:  Annu Rev Microbiol       Date:  1999       Impact factor: 15.500

2.  Origin and evolution of circadian clock genes in prokaryotes.

Authors:  Volodymyr Dvornyk; Oxana Vinogradova; Eviatar Nevo
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

3.  Visualizing a circadian clock protein: crystal structure of KaiC and functional insights.

Authors:  Rekha Pattanayek; Jimin Wang; Tetsuya Mori; Yao Xu; Carl Hirschie Johnson; Martin Egli
Journal:  Mol Cell       Date:  2004-08-13       Impact factor: 17.970

4.  Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses.

Authors:  Yao Xu; Tetsuya Mori; Rekha Pattanayek; Sabuj Pattanayek; Martin Egli; Carl Hirschie Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-03       Impact factor: 11.205

5.  Expression of a gene cluster kaiABC as a circadian feedback process in cyanobacteria.

Authors:  M Ishiura; S Kutsuna; S Aoki; H Iwasaki; C R Andersson; A Tanabe; S S Golden; C H Johnson; T Kondo
Journal:  Science       Date:  1998-09-04       Impact factor: 47.728

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

Review 8.  Precise circadian clocks in prokaryotic cyanobacteria.

Authors:  Carl Hirschie Johnson
Journal:  Curr Issues Mol Biol       Date:  2004-07       Impact factor: 2.081

  8 in total
  1 in total

1.  Expression, purification, crystallization and preliminary X-ray analysis of the KaiC-like protein PH0187 from the hyperthermophilic archaeon Pyrococcus horikoshii OT3.

Authors:  Hee-Jin Kang; Keiko Kubota; Ken-ichi Miyazono; Masaru Tanokura
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-24
  1 in total

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