Literature DB >> 16581376

How hydrogen bonds shape membrane protein structure.

Stephen H White1.   

Abstract

The energetic cost of partitioning peptide bonds into membrane bilayers is prohibitive unless the peptide bonds participate in hydrogen bonds. However, even then there is a significant free energy penalty for dehydrating the peptide bonds that can only be overcome by favorable hydrophobic interactions. Membrane protein structure formation is thus dominated by hydrogen bonding interactions, which is the subject of this review.

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Year:  2005        PMID: 16581376     DOI: 10.1016/S0065-3233(05)72006-4

Source DB:  PubMed          Journal:  Adv Protein Chem        ISSN: 0065-3233


  14 in total

1.  Geometry of hydrogen bonds formed by lipid bilayer nitroxide probes: a high-frequency pulsed ENDOR/EPR study.

Authors:  Tatyana I Smirnova; Alex I Smirnov; Serguei V Paschenko; Oleg G Poluektov
Journal:  J Am Chem Soc       Date:  2007-03-07       Impact factor: 15.419

2.  The effect of loops on the structural organization of alpha-helical membrane proteins.

Authors:  Oznur Tastan; Judith Klein-Seetharaman; Hagai Meirovitch
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

3.  Molecular dynamics studies of transportan 10 (tp10) interacting with a POPC lipid bilayer.

Authors:  Christina M Dunkin; Antje Pokorny; Paulo F Almeida; Hee-Seung Lee
Journal:  J Phys Chem B       Date:  2010-12-31       Impact factor: 2.991

4.  Characterizing and predicting the functional and conformational diversity of seven-transmembrane proteins.

Authors:  Ravinder Abrol; Soo-Kyung Kim; Jenelle K Bray; Adam R Griffith; William A Goddard
Journal:  Methods       Date:  2011-12-17       Impact factor: 3.608

Review 5.  Determining peptide partitioning properties via computer simulation.

Authors:  Jakob P Ulmschneider; Magnus Andersson; Martin B Ulmschneider
Journal:  J Membr Biol       Date:  2010-11-25       Impact factor: 1.843

Review 6.  Hydrogen bond dynamics in membrane protein function.

Authors:  Ana-Nicoleta Bondar; Stephen H White
Journal:  Biochim Biophys Acta       Date:  2011-12-08

7.  Effects of tryptophan microenvironment, soluble domain, and vesicle size on the thermodynamics of membrane protein folding: lessons from the transmembrane protein OmpA.

Authors:  Katheryn M Sanchez; Jonathan E Gable; Diana E Schlamadinger; Judy E Kim
Journal:  Biochemistry       Date:  2008-12-02       Impact factor: 3.162

8.  Early evolutionary loss of the lipid A modifying enzyme PagP resulting in innate immune evasion in Yersinia pestis.

Authors:  Courtney E Chandler; Erin M Harberts; Mark R Pelletier; Iyarit Thaipisuttikul; Jace W Jones; Adeline M Hajjar; Jason W Sahl; David R Goodlett; Aaron C Pride; David A Rasko; M Stephen Trent; Russell E Bishop; Robert K Ernst
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-31       Impact factor: 11.205

9.  Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins.

Authors:  Nathan Hyunjoong Joh; Andrew Min; Salem Faham; Julian P Whitelegge; Duan Yang; Virgil L Woods; James U Bowie
Journal:  Nature       Date:  2008-05-25       Impact factor: 49.962

10.  Importance of indole N-H hydrogen bonding in the organization and dynamics of gramicidin channels.

Authors:  Arunima Chaudhuri; Sourav Haldar; Haiyan Sun; Roger E Koeppe; Amitabha Chattopadhyay
Journal:  Biochim Biophys Acta       Date:  2013-10-19
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