Literature DB >> 16578715

Empirical correlation between hydrophobic free energy and aqueous cavity surface area.

J A Reynolds1, D B Gilbert, C Tanford.   

Abstract

The unitary free energy of transfer of a hydrocarbon molecule from a hydrocarbon solvent to an aqueous medium is a measure of the hydrophobic interaction in the aqueous medium. We have reexamined available data on this phenomenon and have confirmed that the free energy for saturated hydrocarbons is proportional to the surface area of the cavity created by the solute in the aqueous solution, with the same proportionality constant for linear, branched, and cyclic hydrocarbon molecules. The numerical value of the proportionality constant is uncertain because absolute and self-consistent area measurements are not available. We estimate that it falls between 20 and 25 cal/mole per A(2) at 25 degrees (for areas measured at the distance of closest approach of water molecules), which is significantly less than the figure of 33 cal/mole per A(2) that has been assigned to the same parameter by Hermann [J. Phys. Chem. 76, 2754-2759 (1972)]. A small discrepancy exists when similar data for homologous series of alkyl derivatives are compared with results based on hydrocarbons themselves, and possible reasons for it are discussed.

Entities:  

Year:  1974        PMID: 16578715      PMCID: PMC388590          DOI: 10.1073/pnas.71.8.2925

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  2 in total

1.  Some factors in the interpretation of protein denaturation.

Authors:  W KAUZMANN
Journal:  Adv Protein Chem       Date:  1959

2.  Hydrophobicity of Long Chain n-Alkyl Carboxylic Acids, as Measured by Their Distribution Between Heptane and Aqueous Solutions.

Authors:  R Smith; C Tanford
Journal:  Proc Natl Acad Sci U S A       Date:  1973-02       Impact factor: 11.205

  2 in total
  68 in total

1.  Implicit solvation in the self-consistent mean field theory method: sidechain modelling and prediction of folding free energies of protein mutants.

Authors:  J Mendes; A M Baptista; M A Carrondo; C M Soares
Journal:  J Comput Aided Mol Des       Date:  2001-08       Impact factor: 3.686

2.  A Monte Carlo study of peptide insertion into lipid bilayers: equilibrium conformations and insertion mechanisms.

Authors:  Michael W Maddox; Marjorie L Longo
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

3.  Differences between pair and bulk hydrophobic interactions.

Authors:  R H Wood; P T Thompson
Journal:  Proc Natl Acad Sci U S A       Date:  1990-02-01       Impact factor: 11.205

4.  Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water.

Authors:  T M Raschke; J Tsai; M Levitt
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-15       Impact factor: 11.205

5.  Relation between the convergence temperatures Th* and Ts* in protein unfolding.

Authors:  R L Baldwin; N Muller
Journal:  Proc Natl Acad Sci U S A       Date:  1992-08-01       Impact factor: 11.205

6.  Driving forces for transmembrane alpha-helix oligomerization.

Authors:  Alex J Sodt; Teresa Head-Gordon
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

7.  Isoenthalpic and isoentropic temperatures and the thermodynamics of protein denaturation.

Authors:  B Lee
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-15       Impact factor: 11.205

Review 8.  Progress in the prediction of pKa values in proteins.

Authors:  Emil Alexov; Ernest L Mehler; Nathan Baker; António M Baptista; Yong Huang; Francesca Milletti; Jens Erik Nielsen; Damien Farrell; Tommy Carstensen; Mats H M Olsson; Jana K Shen; Jim Warwicker; Sarah Williams; J Michael Word
Journal:  Proteins       Date:  2011-10-15

9.  Secondary structure, membrane localization, and coassembly within phospholipid membranes of synthetic segments derived from the N- and C-termini regions of the ROMK1 K+ channel.

Authors:  I Ben-Efraim; Y Shai
Journal:  Protein Sci       Date:  1996-11       Impact factor: 6.725

10.  Water-exclusion and liquid-structure forces in implicit solvation.

Authors:  Sergio A Hassan; Peter J Steinbach
Journal:  J Phys Chem B       Date:  2011-11-15       Impact factor: 2.991

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